RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 CCDC157Q569K6 752 aa13□□□□□ -0.33
SSR4-210ENST00000485612 INTS6LQ5JSJ4 861 aaKnown RBP13□□□□□ -0.33
SSR4-210ENST00000485612 RRAGBQ5VZM2 374 aa13□□□□□ -0.33
SSR4-210ENST00000485612 RHBDF2Q6PJF5 856 aa13□□□□□ -0.33
SSR4-210ENST00000485612 IL27RAQ6UWB1 636 aa13□□□□□ -0.33
SSR4-210ENST00000485612 NT5DC4Q86YG4 428 aa13□□□□□ -0.33
SSR4-210ENST00000485612 ZNF513Q8N8E2 541 aaPredicted RBP13□□□□□ -0.33
SSR4-210ENST00000485612 NOC3LQ8WTT2 800 aaKnown RBP13□□□□□ -0.33
SSR4-210ENST00000485612 ACCSQ96QU6 501 aa13□□□□□ -0.33
SSR4-210ENST00000485612 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
SSR4-210ENST00000485612 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
SSR4-210ENST00000485612 RBAKQ9NYW8 714 aaPredicted RBP13□□□□□ -0.33
SSR4-210ENST00000485612 SIX4Q9UIU6 781 aa13□□□□□ -0.33
SSR4-210ENST00000485612 GTF3C4Q9UKN8 822 aa13□□□□□ -0.33
SSR4-210ENST00000485612 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
SSR4-210ENST00000485612 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
SSR4-210ENST00000485612 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 PRPF6O94906 941 aaKnown RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 IDEP14735 1019 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 GAP43P17677 238 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 NDUFV2P19404 249 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 WASP42768 502 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 POU5F1Q01860 360 aaKnown RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 SEMG2Q02383 582 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 CUL4AQ13619 759 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 SUZ12Q15022 739 aaKnown RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 POSTNQ15063 836 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 HLA-BQ31612 363 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 KIAA1958Q8N8K9 716 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 LEO1Q8WVC0 666 aaPredicted RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 PANK2Q9BZ23 570 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 MTMR12Q9C0I1 747 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 CCDC39Q9UFE4 941 aa12.99□□□□□ -0.33
SSR4-210ENST00000485612 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
SSR4-210ENST00000485612 A0A1W2PQF6 199 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 MEI4A8MW99 385 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
SSR4-210ENST00000485612 TNFSF14O43557 240 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 HUS1O60921 280 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ATP2C2O75185 946 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ADH1CP00326 375 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 KRT19P08727 400 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 GARTP22102 1010 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 NTSR1P30989 418 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 PNPLA4P41247 253 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 DHRS13Q6UX07 377 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ADGRF2Q8IZF7 708 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 PHTF2Q8N3S3 785 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
SSR4-210ENST00000485612 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 FAM181AQ8N9Y4 354 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 OR5B17Q8NGF7 314 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 IPO4Q8TEX9 1081 aaKnown RBP12.98□□□□□ -0.33
SSR4-210ENST00000485612 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 BAP1Q92560 729 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ERLEC1Q96DZ1 483 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ACBD6Q9BR61 282 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 MIR1-1HGQ9H1L0 117 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ABCB6Q9NP58 842 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSR4-210ENST00000485612 EXOC7Q9UPT5 735 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 BTBD3Q9Y2F9 522 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 SNX9Q9Y5X1 595 aa12.98□□□□□ -0.33
SSR4-210ENST00000485612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
SSR4-210ENST00000485612 ERVH48-1M5A8F1 160 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 WISP1O95388 367 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 ADH5P11766 374 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 PFKLP17858 780 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 PSMC1P62191 440 aaKnown RBP12.97□□□□□ -0.33
SSR4-210ENST00000485612 MYL7Q01449 175 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 BNC1Q01954 994 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSR4-210ENST00000485612 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 PREPLQ4J6C6 727 aaPredicted RBP12.97□□□□□ -0.33
SSR4-210ENST00000485612 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 TMPRSS12Q86WS5 348 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 KBTBD7Q8WVZ9 684 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 CD93Q9NPY3 652 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 GDAP2Q9NXN4 497 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 DNMT3LQ9UJW3 386 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 ITGA11Q9UKX5 1188 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 HCN2Q9UL51 889 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
SSR4-210ENST00000485612 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms