RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024		A0A087WWL8	130 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	TCRBV7S2A1N4T	A0A589	114 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	SERINC4	A6NH21	518 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024		F8W8V4	182 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	IRAK2	O43187	625 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	RASSF9	O75901	435 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	GRP	P07492	148 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	HTRA4	P83105	476 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	PIGF	Q07326	219 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	CTBP1	Q13363	440 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	PRKG1	Q13976	671 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	INSC	Q1MX18	579 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	AGAP9	Q5VTM2	703 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	FAM160B1	Q5W0V3	765 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	EFCAB12	Q6NXP0	572 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	LDHAL6A	Q6ZMR3	332 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	MICU3	Q86XE3	530 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ZDHHC17	Q8IUH5	632 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	MPP5	Q8N3R9	675 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	MYCT1	Q8N699	235 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	PCSK9	Q8NBP7	692 aa	Known RBP	4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	FBXO18	Q8NFZ0	1043 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	OR56A1	Q8NGH5	318 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	TFAP2C	Q92754	450 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	EVI5L	Q96CN4	794 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	CEP95	Q96GE4	821 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	PPP1R9B	Q96SB3	815 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	RMDN3	Q96TC7	470 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	CNPPD1	Q9BV87	410 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ZCWPW1	Q9H0M4	648 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	DHX36	Q9H2U1	1008 aa	Known RBP	4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	SMURF2	Q9HAU4	748 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	TMEM8A	Q9HCN3	771 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	TBCCD1	Q9NVR7	557 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ITGB1BP2	Q9UKP3	347 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC39A10	Q9ULF5	831 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	LZTS1	Q9Y250	596 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	SOGA1	O94964	1423 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	NUP160	Q12769	1436 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	FAM135B	Q49AJ0	1406 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	CD109	Q6YHK3	1445 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	WDR97	A6NE52	1622 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	OBSCN	Q5VST9	7968 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	ZNF785	A8K8V0	405 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	CCP110	O43303	1012 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	UNC5C	O95185	931 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	SNHG28	P0DPA3	235 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	TXN	P10599	105 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	KEL	P23276	732 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	IL1R2	P27930	398 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	VIPR2	P41587	438 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC11A2	P49281	568 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	ZNF135	P52742	658 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	COPA	P53621	1224 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	POLG	P54098	1239 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	RAP2B	P61225	183 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	PSMC1	P62191	440 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	UTP14C	Q5TAP6	766 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	KLHDC7A	Q5VTJ3	777 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	MMS22L	Q6ZRQ5	1243 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	UNC13D	Q70J99	1090 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	KRT28	Q7Z3Y7	464 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	USP37	Q86T82	979 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	MAPKAPK5	Q8IW41	473 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC15A4	Q8N697	577 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	SNX27	Q96L92	541 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	STK31	Q9BXU1	1019 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	FAM83D	Q9H4H8	585 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	GSTO2	Q9H4Y5	243 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	HEYL	Q9NQ87	328 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC23A1	Q9UHI7	598 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	HDAC9	Q9UKV0	1011 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	MAN2B2	Q9Y2E5	1009 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	TBC1D30	Q9Y2I9	924 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	PEG3	Q9GZU2	1588 aa		4.55	□□□□□ -1.68
VPS8-223	ENST00000485024	ALK	Q9UM73	1620 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	TTC37	Q6PGP7	1564 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	LOC102723971	A0A1B0GUV8	181 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	AQP7P3	A6NL99	342 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	SYT5	O00445	386 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	PODXL	O00592	558 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	SOAT2	O75908	522 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	SBK3	P0C264	359 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	PIM1	P11309	404 aa	Predicted RBP	4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	CHN2	P52757	468 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	ARL4C	P56559	192 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	PTK2B	Q14289	1009 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC29A2	Q14542	456 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	PFKFB4	Q16877	469 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	FCRLB	Q6BAA4	426 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	UBE3B	Q7Z3V4	1068 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	DEFB132	Q7Z7B7	95 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	CACNA2D3	Q8IZS8	1091 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	CELF5	Q8N6W0	485 aa	Known RBP	4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	NUP133	Q8WUM0	1156 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	MAML1	Q92585	1016 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	MYOC	Q99972	504 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	TMEM120A	Q9BXJ8	343 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms