RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 A0A1W2PQ27 194 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 A0A1W2PQ64 194 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 A0A1W2PQD8 194 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 TISP43B9A030 160 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 H0Y858 1186 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CHADO15335 359 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 EXOC3O60645 756 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 RPN1P04843 607 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ITGB2P05107 769 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 HAPLN1P10915 354 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 P4HA1P13674 534 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CEBPBP17676 345 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PFKLP17858 780 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 TNNI1P19237 187 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 EPHA1P21709 976 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 AVPR1AP37288 418 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 MAGEA11P43364 429 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PPP3CCP48454 512 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 GUCY2FP51841 1108 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CASP5P51878 434 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ENPEPQ07075 957 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 BFSP1Q12934 665 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 TRPC3Q13507 836 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SNW1Q13573 536 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PSMD6Q15008 389 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ANGPT1Q15389 498 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF528Q3MIS6 628 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ARHGAP29Q52LW3 1261 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 TANGO2Q6ICL3 276 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 VSTM1Q6UX27 236 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SPATA2LQ8IUW3 424 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 EFCAB13Q8IY85 973 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ADGRF2Q8IZF7 708 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PDCL2Q8N4E4 241 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CELF5Q8N6W0 485 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CCDC26Q8TAB7 109 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 ZSCAN18Q8TBC5 510 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CSGALNACT1Q8TDX6 532 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 EPS8L3Q8TE67 593 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 NOC3LQ8WTT2 800 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 MRPS31Q92665 395 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 NKD2Q969F2 451 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SYAP1Q96A49 352 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 HPDLQ96IR7 371 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PGLYRP2Q96PD5 576 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 KXD1Q9BQD3 176 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 MTMR12Q9C0I1 747 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 BHLHE41Q9C0J9 482 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SMOC2Q9H3U7 446 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PCIF1Q9H4Z3 704 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 TASP1Q9H6P5 420 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 KIF9Q9HAQ2 790 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 PDE11AQ9HCR9 933 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 DDX43Q9NXZ2 648 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 HOOK1Q9UJC3 728 aaKnown RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 CDH9Q9ULB4 789 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 SNX9Q9Y5X1 595 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 EP300Q09472 2414 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-215ENST00000484203 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.36
PTCD3-215ENST00000484203 ARID2Q68CP9 1835 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 KIAA1671Q9BY89 1806 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GOLGA8IPA6NC78 632 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 ANKRD33BA6NCL7 494 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GOLGA6L4A6NEF3 574 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GOLGA8JA6NMD2 632 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 METTL12A8MUP2 240 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 PDXKO00764 312 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GABRDO14764 452 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 PPEF2O14830 753 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 IKBKBO14920 756 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 LAMTOR5O43504 91 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CALUO43852 315 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 ADAM23O75077 832 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TACC1O75410 805 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 OR4Q2P0C623 313 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 DLATP10515 647 aaKnown RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GABRR2P28476 465 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 GDI1P31150 447 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SYKP43405 635 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 AFMP43652 599 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TNNC1P63316 161 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 NUCB2P80303 420 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CYP24A1Q07973 514 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 FCHO2Q0JRZ9 810 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 LRRC32Q14392 662 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 UBXN2BQ14CS0 331 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SETDB1Q15047 1291 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TEAD2Q15562 447 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 DGKKQ5KSL6 1271 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TPRG1Q6ZUI0 275 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TRAPPC11Q7Z392 1133 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 LIMS2Q7Z4I7 341 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 RALGPS2Q86X27 583 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms