RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 NMUR1Q9HB89 426 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 OSER1Q9NX31 292 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 GTSE1Q9NYZ3 720 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 CLIC5Q9NZA1 410 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 RAPGEFL1Q9UHV5 662 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 MRPS17Q9Y2R5 130 aaKnown RBP18.96■□□□□ 0.63
HDAC6-225ENST00000483506 CPQQ9Y646 472 aa18.96■□□□□ 0.63
HDAC6-225ENST00000483506 A0A1W2PQH9 124 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 TULP2O00295 520 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 TLR5O60602 858 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 MBL2P11226 248 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 KRT5P13647 590 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 RFX1P22670 979 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 TARSP26639 723 aaKnown RBP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 CTHP32929 405 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 RUNX3Q13761 415 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 SCD5Q86SK9 330 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 CLDN23Q96B33 292 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 NAT10Q9H0A0 1025 aaKnown RBP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 TAB2Q9NYJ8 693 aa18.95■□□□□ 0.62
HDAC6-225ENST00000483506 LIMA1Q9UHB6 759 aaKnown RBP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 AJAP1Q9UKB5 411 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-225ENST00000483506 LRRC10BA6NIK2 292 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 SPECC1L-ADORA2AF8WAN1 911 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 STK25O00506 426 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 GALR2O43603 387 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-225ENST00000483506 LETM1O95202 739 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-225ENST00000483506 MAGEA9P43362 315 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 RPL34P49207 117 aaKnown RBP18.94■□□□□ 0.62
HDAC6-225ENST00000483506 TKTL1P51854 596 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 FZD5Q13467 585 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 EML3Q32P44 896 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 TRIM68Q6AZZ1 485 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 BHLHA9Q7RTU4 235 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 ARHGAP18Q8N392 663 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 PRSS33Q8NF86 280 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 UBA3Q8TBC4 463 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 FAM3CQ92520 227 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 EBF3Q9H4W6 596 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 PLCB1Q9NQ66 1216 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
HDAC6-225ENST00000483506 DNAJC12Q9UKB3 198 aa18.94■□□□□ 0.62
HDAC6-225ENST00000483506 MTF2Q9Y483 593 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-225ENST00000483506 OTOL1A6NHN0 477 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 FAM170BA6NMN3 283 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 M0QYV0 167 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 ZBED1O96006 694 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 CALCAP01258 141 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 CD72P21854 359 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 RPS9P46781 194 aaKnown RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 KPNA1P52294 538 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 UBXN2BQ14CS0 331 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 ARHGAP44Q17R89 818 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 KLHDC7AQ5VTJ3 777 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 DTWD2Q8NBA8 298 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 ZNF606Q8WXB4 792 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 SECISBP2LQ93073 1101 aaKnown RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 ATP2A3Q93084 1043 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 CHFRQ96EP1 664 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 HSFY1Q96LI6 401 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 CDK5RAP1Q96SZ6 601 aaKnown RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
HDAC6-225ENST00000483506 CNGB3Q9NQW8 809 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 SMPD4Q9NXE4 827 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 WNT6Q9Y6F9 365 aa18.93■□□□□ 0.62
HDAC6-225ENST00000483506 E2F8A0AVK6 867 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 SLC9A3R1O14745 358 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-225ENST00000483506 MED7O43513 233 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 GABBR2O75899 941 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 DCNP07585 359 aaKnown RBP18.92■□□□□ 0.62
HDAC6-225ENST00000483506 TPM2P07951 284 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 RARGP13631 454 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ARSAP15289 507 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 GNA15P30679 374 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ATP5C1P36542 298 aaKnown RBP18.92■□□□□ 0.62
HDAC6-225ENST00000483506 GPD2P43304 727 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 SOX9P48436 509 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 IFNAR2P48551 515 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ADIGQ0VDE8 80 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 PMF1Q6P1K2 205 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 APTXQ7Z2E3 356 aaKnown RBP18.92■□□□□ 0.62
HDAC6-225ENST00000483506 TADA2BQ86TJ2 420 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 FAM71AQ8IYT1 594 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 CPA6Q8N4T0 437 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ANKRD20A12PQ8NF67 263 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 KLF16Q9BXK1 252 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ULBP1Q9BZM6 244 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 ECT2Q9H8V3 914 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 LRRC4Q9HBW1 653 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 CFAP97Q9P2B7 532 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 NAGPAQ9UK23 515 aa18.92■□□□□ 0.62
HDAC6-225ENST00000483506 PES1O00541 588 aaKnown RBP18.91■□□□□ 0.62
HDAC6-225ENST00000483506 NCAM2O15394 837 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 TBX18O95935 607 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 RALAP11233 206 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 UCHL3P15374 230 aa18.91■□□□□ 0.62
HDAC6-225ENST00000483506 COPB1P53618 953 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms