RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TRAPPC11Q7Z392 1133 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 DDX42Q86XP3 938 aaKnown RBP eCLIP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 TMEM25Q86YD3 366 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 MIB1Q86YT6 1006 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 BBS7Q8IWZ6 715 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 NUP93Q8N1F7 819 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 PHTF2Q8N3S3 785 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 MINDY1Q8N5J2 469 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 HPS3Q969F9 1004 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 FBXO32Q969P5 355 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 ERLEC1Q96DZ1 483 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 ZFRQ96KR1 1074 aaKnown RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 CAMK1GQ96NX5 476 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 KCNK16Q96T55 309 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 B3GNT5Q9BYG0 378 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 DPEP3Q9H4B8 488 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 CAPN10Q9HC96 672 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 CALCOCO1Q9P1Z2 691 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 SH3BP1Q9Y3L3 701 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 SRPRBQ9Y5M8 271 aaKnown RBP7.85□□□□□ -1.15
CSDE1-206ENST00000483030 LAMA1P25391 3075 aa7.85□□□□□ -1.15
CSDE1-206ENST00000483030 MYH11P35749 1972 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ANK1P16157 1881 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 A0A1W2PQF6 199 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 VPS37CA5D8V6 355 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 FAM221BA6H8Z2 402 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ARHGAP33O14559 1287 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 HOXC11O43248 304 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 SH3BP5O60239 455 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TACC1O75410 805 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 SYPP08247 313 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 FAM163BP0C2L3 166 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 HOXB2P14652 356 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TNNI1P19237 187 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 NTSR1P30989 418 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 HOXD13P35453 343 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TXLNAP40222 546 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 STAT6P42226 847 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CEBPZQ03701 1054 aaKnown RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TRIP6Q15654 476 aaKnown RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 C8orf34Q49A92 452 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 FAM173BQ6P4H8 233 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 C19orf48Q6RUI8 117 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CCDC73Q6ZRK6 1079 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TRMT11Q7Z4G4 463 aaKnown RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 RABEPKQ7Z6M1 372 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 RAB44Q7Z6P3 723 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 WDR49Q8IV35 697 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 SLC41A1Q8IVJ1 513 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ETFBKMTQ8IXQ9 262 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CCDC65Q8IXS2 484 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TRIML1Q8N9V2 468 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 TERB1Q8NA31 727 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 B3GALNT2Q8NCR0 500 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 GLIS3Q8NEA6 775 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 SCAMP5Q8TAC9 235 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 WBP2Q969T9 261 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CCDC127Q96BQ5 260 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 OTUB2Q96DC9 234 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ACOX2Q99424 681 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ELOVL4Q9GZR5 314 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CCSER2Q9H7U1 834 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 KIAA1586Q9HCI6 787 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 SPHK2Q9NRA0 654 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 HSPBP1Q9NZL4 362 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 NXF1Q9UBU9 619 aaKnown RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CYP8B1Q9UNU6 501 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-206ENST00000483030 CACNA1EQ15878 2313 aa7.84□□□□□ -1.15
CSDE1-206ENST00000483030 GON4LQ3T8J9 2241 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 SPEGQ15772 3267 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PKD1L2Q7Z442 2459 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 A0A087X0B3 334 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 IGHV1OR15-9A0A0B4J2B8 117 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 A0A1W2PQD8 194 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 A8MXQ7 604 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF217O75362 1048 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 RTN3O95197 1032 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 CAPNS1P04632 268 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 IRF1P10914 325 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 NDUFV2P19404 249 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 MAOBP27338 520 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 CDH8P55286 799 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 MYL6P60660 151 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 TNNC1P63316 161 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 SCAPQ12770 1279 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 TRPC3Q13507 836 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 HNRNPDQ14103 355 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 SNRNP35Q16560 246 aaKnown RBP7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PLEKHG6Q3KR16 790 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 EGFLAMQ63HQ2 1017 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 SDE2Q6IQ49 451 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 STXBP4Q6ZWJ1 553 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 PROSER1Q86XN7 944 aa7.83□□□□□ -1.16
CSDE1-206ENST00000483030 CHPFQ8IZ52 775 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms