RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZNF696Q9H7X3 374 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 C10orf88Q9H8K7 445 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 RAB26Q9ULW5 256 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 WDR37Q9Y2I8 494 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 SCN4AP35499 1836 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
RPGR-208ENST00000482855 UFL1O94874 794 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 SRGAP2BP0DMP2 458 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.57
RPGR-208ENST00000482855 CDKN2BP42772 138 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 CD97P48960 835 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 RPL7AP62424 266 aaKnown RBP11.46□□□□□ -0.57
RPGR-208ENST00000482855 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.57
RPGR-208ENST00000482855 BTKQ06187 659 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 MPP3Q13368 585 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 LRRC38Q5VT99 294 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 BORAQ6PGQ7 559 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 DENND5BQ6ZUT9 1274 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 SLC26A11Q86WA9 606 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 IGDCC3Q8IVU1 814 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 WDR75Q8IWA0 830 aaKnown RBP11.46□□□□□ -0.57
RPGR-208ENST00000482855 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 POMGNT1Q8WZA1 660 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 MKL1Q969V6 931 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 CNBD2Q96M20 576 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 SLC13A1Q9BZW2 595 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 FAF1Q9UNN5 650 aaPredicted RBP11.46□□□□□ -0.57
RPGR-208ENST00000482855 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 ZNF711Q9Y462 761 aa11.46□□□□□ -0.57
RPGR-208ENST00000482855 H3BNX3 289 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 CYB561D2O14569 222 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.58
RPGR-208ENST00000482855 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 SPAG6O75602 509 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 CFHP08603 1231 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 SNRPAP09012 282 aaKnown RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 POLR2MP0CAP2 368 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 UBXN2AP68543 259 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 STX3Q13277 289 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 SMIM5Q71RC9 77 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 PHF13Q86YI8 300 aaPredicted RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 HPS6Q86YV9 775 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 PPM1NQ8N819 430 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 PPP1R14CQ8TAE6 165 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 ACTL9Q8TC94 416 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 TMC2Q8TDI7 906 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 TEKT1Q969V4 418 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 NLRP4Q96MN2 994 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 PHF12Q96QT6 1004 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 APOL6Q9BWW8 343 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 C6orf203Q9P0P8 240 aaPredicted RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 SAE1Q9UBE0 346 aaPredicted RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 APOBEC2Q9Y235 224 aaKnown RBP11.46□□□□□ -0.58
RPGR-208ENST00000482855 AP4B1Q9Y6B7 739 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 SLX4Q8IY92 1834 aa11.46□□□□□ -0.58
RPGR-208ENST00000482855 ADCY3O60266 1144 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 ZNF189O75820 626 aaPredicted RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 FAM155BO75949 473 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 CRTAMO95727 393 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 CFBP00751 764 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 CD48P09326 243 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 NR1H2P55055 460 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 HDAC4P56524 1084 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 PEX3P56589 373 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 RARS2Q5T160 578 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 LGSNQ5TDP6 509 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 PRR5LQ6MZQ0 368 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 IYDQ6PHW0 289 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 KBTBD6Q86V97 674 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 ZNF410Q86VK4 478 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 PQLC1Q8N2U9 271 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 C20orf27Q9GZN8 174 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 XAB2Q9HCS7 855 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 FAIMQ9NVQ4 179 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 DDX56Q9NY93 547 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 AK5Q9Y6K8 562 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 DDX39AO00148 427 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 FAM58BPP0C7Q3 252 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 CPA3P15088 417 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 MYBPC1Q00872 1141 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 ANGEL2Q5VTE6 544 aaKnown RBP11.45□□□□□ -0.58
RPGR-208ENST00000482855 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
RPGR-208ENST00000482855 SHCBP1LQ9BZQ2 653 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms