RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ZIK1Q3SY52 487 aaPredicted RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 L1TD1Q5T7N2 865 aaKnown RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 KIRREL2Q6UWL6 708 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 MAEAQ7L5Y9 396 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 NEK8Q86SG6 692 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 SMC5Q8IY18 1101 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 FAM156AQ8NDB6 213 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 ACRBPQ8NEB7 543 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 PPP2R3CQ969Q6 453 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 PPP1R9BQ96SB3 815 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 ELAC2Q9BQ52 826 aaKnown RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 MACROD1Q9BQ69 325 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 SNX14Q9Y5W7 946 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 DENND4BO75064 1496 aaPredicted RBP4.47□□□□□ -1.69
GTF3A-207ENST00000482655 C3P01024 1663 aa4.47□□□□□ -1.69
GTF3A-207ENST00000482655 AKNAQ7Z591 1439 aa4.46□□□□□ -1.69
GTF3A-207ENST00000482655 ZFYVE16Q7Z3T8 1539 aa4.46□□□□□ -1.69
GTF3A-207ENST00000482655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.46□□□□□ -1.69
GTF3A-207ENST00000482655 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 NUP153P49790 1475 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 IQSEC2Q5JU85 1478 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 A6NNZ2 444 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PRRT4C9JH25 899 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 H7C1Q1 480 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 GOLIM4O00461 696 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PPP6CO00743 305 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PMM2O15305 246 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PQBP1O60828 265 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PDE8BO95263 885 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 TUBB4AP04350 444 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PRKAR1BP31321 381 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 MTHFSP49914 203 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 HNRNPA0Q13151 305 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 IFIT5Q13325 482 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 DCAF12L1Q5VU92 463 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 PAPD7Q5XG87 772 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 SERPINA13PQ6UXR4 307 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF66Q6ZN08 573 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 YTHDF3Q7Z739 585 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 IL31RAQ8NI17 732 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 TMEM171Q8WVE6 324 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF778Q96MU6 729 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 ASB2Q96Q27 587 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 C1QTNF7Q9BXJ2 289 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 DPH1Q9BZG8 443 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 A1CFQ9NQ94 594 aaKnown RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 CHST12Q9NRB3 414 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 RGS17Q9UGC6 210 aaPredicted RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 GABRQQ9UN88 632 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 NCOA1Q15788 1441 aa4.46□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF335Q9H4Z2 1342 aaPredicted RBP4.46□□□□□ -1.7
GTF3A-207ENST00000482655 CFAP69A5D8W1 941 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 TMEM233B4DJY2 109 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 UBE2Q2LH0YL09 131 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 AP4M1O00189 453 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 RGS10O43665 173 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 RASSF9O75901 435 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 USP1O94782 785 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 VNN1O95497 513 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 LATS1O95835 1130 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 NHLRC4P0CG21 123 aaPredicted RBP4.45□□□□□ -1.7
GTF3A-207ENST00000482655 BRAFP15056 766 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 AK2P54819 239 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
GTF3A-207ENST00000482655 E2F1Q01094 437 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 CCNIQ14094 377 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 MORC3Q14149 939 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 LY6KQ17RY6 165 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 INSCQ1MX18 579 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 CEP78Q5JTW2 689 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 RNF220Q5VTB9 566 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 CACHD1Q5VU97 1274 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SLC9A4Q6AI14 798 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SLC18B1Q6NT16 456 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SWSAP1Q6NVH7 229 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 DPY19L3Q6ZPD9 716 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 CHSY1Q86X52 802 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 KIAA0319LQ8IZA0 1049 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SIRT6Q8N6T7 355 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 TERB1Q8NA31 727 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SNX18Q96RF0 628 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 STRBPQ96SI9 672 aaKnown RBP4.45□□□□□ -1.7
GTF3A-207ENST00000482655 MYD88Q99836 296 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 CIPCQ9C0C6 399 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 NUP62CLQ9H1M0 184 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 GBA2Q9HCG7 927 aaPredicted RBP4.45□□□□□ -1.7
GTF3A-207ENST00000482655 SACM1LQ9NTJ5 587 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 TPCN1Q9ULQ1 816 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 L1RE1Q9UN81 338 aa4.45□□□□□ -1.7
GTF3A-207ENST00000482655 FANCAO15360 1455 aa4.44□□□□□ -1.7
GTF3A-207ENST00000482655 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms