RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 OSER1Q9NX31 292 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 RAB20Q9NX57 234 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 HELZP42694 1942 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 PRR5-ARHGAP8B1AHC4 643 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 HOXC11O43248 304 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 STX10O60499 249 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SMC2O95347 1197 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 ABL1P00519 1130 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 FAM200BP0CF97 657 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 BMP6P22004 513 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MXI1P50539 228 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 RAD23BP54727 409 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MAP3K7CLP57077 242 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MRPS21P82921 87 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 ARHGAP8P85298 464 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 LMNB2Q03252 620 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 LRRC63Q05C16 580 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 CBWD6Q4V339 395 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 CBWD3Q5JTY5 395 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 CBWD5Q5RIA9 395 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 GPRIN1Q7Z2K8 1008 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SCD5Q86SK9 330 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 RASSF3Q86WH2 238 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 FAM160A2Q8N612 972 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SLC4A11Q8NBS3 891 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 TATDN2Q93075 761 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 DHTKD1Q96HY7 919 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 TLR8Q9NR97 1041 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 FAM49BQ9NUQ9 324 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SLC8A2Q9UPR5 921 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 NCOR2Q9Y618 2525 aa10.27□□□□□ -0.77
TMEM39A-207ENST00000482162 SPTBN2O15020 2390 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 ANTXRLA6NF34 631 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 TLR5O60602 858 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 APBB3O95704 486 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 TBX18O95935 607 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 ADH1CP00326 375 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 EPB41P11171 864 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 SDHBP21912 280 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 GRIA2P42262 883 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 TNFRSF4P43489 277 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 SLC6A11P48066 632 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 DMC1Q14565 340 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 CSRP2Q16527 193 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 HSF5Q4G112 596 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 RAB41Q5JT25 222 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 LY6G5CQ5SRR4 150 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 TTI2Q6NXR4 508 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 C12orf40Q86WS4 652 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 BBS7Q8IWZ6 715 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 UBR7Q8N806 425 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 RPLP0P6Q8NHW5 317 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 ACDQ96AP0 544 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 TMEM176AQ96HP8 235 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 PNKPQ96T60 521 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 ARID3AQ99856 593 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 NMUR1Q9HB89 426 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 MARK1Q9P0L2 795 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 RAB23Q9ULC3 237 aa10.26□□□□□ -0.77
TMEM39A-207ENST00000482162 GOLGA6L4A6NEF3 574 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 AXIN1O15169 862 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 FOXD2O60548 495 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 RPP40O75818 363 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 KAT7O95251 611 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ADH5P11766 374 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ADORA2BP29275 332 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ATP5C1P36542 298 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PPP1R2P41236 205 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PXNP49023 591 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PSEN1P49768 467 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 GAD2Q05329 585 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 IFRD2Q12894 506 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 LPAL2Q16609 132 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 RSPO4Q2I0M5 234 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 PM20D1Q6GTS8 502 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 Q6ZNB5 142 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 KBTBD6Q86V97 674 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms