RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 SECISBP2LQ93073 1101 aaKnown RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 GCNAQ96QF7 691 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 TASP1Q9H6P5 420 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 NMUR1Q9HB89 426 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 TRPC7Q9HCX4 862 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 FAM207AQ9NSI2 230 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 OSER1Q9NX31 292 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 CYTH4Q9UIA0 394 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 ZFP37Q9Y6Q3 630 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 GPR179Q6PRD1 2367 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 MIA3Q5JRA6 1907 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 FAM170AA1A519 330 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 M0QYV0 167 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 ECI2O75521 394 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 FGF19O95750 216 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 OAS1P00973 400 aaKnown RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 UCHL3P15374 230 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 CLCN1P35523 988 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 RGS7P49802 495 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 BCAT1P54687 386 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 GPC5P78333 572 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 FOXK1P85037 733 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 TDGQ13569 410 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 CNGA2Q16280 664 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 ARHGAP15Q53QZ3 475 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 RAB41Q5JT25 222 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 ENOSF1Q7L5Y1 443 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 FAM71AQ8IYT1 594 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 USP13Q92995 863 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 NKD2Q969F2 451 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 RNF38Q9H0F5 515 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 TRPV4Q9HBA0 871 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 PLCB1Q9NQ66 1216 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 UXTQ9UBK9 157 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 TJP2Q9UDY2 1190 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-210ENST00000481508 DUSP12Q9UNI6 340 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
SSBP1-210ENST00000481508 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 HEPACAM2A8MVW5 462 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 F8VZ95 297 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 PIK3R2O00459 728 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 XPO1O14980 1071 aaKnown RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 THAP12O43422 761 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 OLFM2O95897 454 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 GNA15P30679 374 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 KIF11P52732 1056 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 JAM2P57087 298 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 UBXN1Q04323 297 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 BST2Q10589 180 aaKnown RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 COL9A2Q14055 689 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 PMF1Q6P1K2 205 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 MTSS1LQ765P7 747 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 CMTM8Q8IZV2 173 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ZNF606Q8WXB4 792 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
SSBP1-210ENST00000481508 WBP2Q969T9 261 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ELSPBP1Q96BH3 223 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ZFYVE19Q96K21 471 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ERGIC2Q96RQ1 377 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 ZFP14Q9HCL3 533 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 PNPLA8Q9NP80 782 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 NLRC4Q9NPP4 1024 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 TRPM5Q9NZQ8 1165 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 NUDT5Q9UKK9 219 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 USP3Q9Y6I4 520 aa11.15□□□□□ -0.62
SSBP1-210ENST00000481508 A0A1W2PQH9 124 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
SSBP1-210ENST00000481508 MDM4O15151 490 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 COCHO43405 550 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 TBX18O95935 607 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 ABL1P00519 1130 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 NUDT7P0C024 238 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 SRFP11831 508 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 TRIM21P19474 475 aaKnown RBP11.14□□□□□ -0.63
SSBP1-210ENST00000481508 DDX6P26196 483 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSBP1-210ENST00000481508 WEE1P30291 646 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 GPD2P43304 727 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 ZNF445P59923 1031 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 FANCCQ00597 558 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms