RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 TMEM196Q5HYL7 178 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
HDAC1-207ENST00000481281 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 TMEM270Q6UE05 265 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 ZNF276Q8N554 614 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 KREMEN1Q96MU8 473 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 RBM12Q9NTZ6 932 aaKnown RBP13.74□□□□□ -0.21
HDAC1-207ENST00000481281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC1-207ENST00000481281 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
HDAC1-207ENST00000481281 A0A1W2PQH9 124 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 E2F8A0AVK6 867 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 GOLGA6L22H0YM25 854 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 TULP2O00295 520 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 SLC9A3R1O14745 358 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 PLA2G4AP47712 749 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 PSEN1P49768 467 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 SLC8A3P57103 927 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 PDE4CQ08493 712 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 BST2Q10589 180 aaKnown RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 FSTL4Q6MZW2 842 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 TRIM65Q6PJ69 517 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 LCLAT1Q6UWP7 414 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 Q6ZS52 159 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 SCD5Q86SK9 330 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 RBBP8NLQ8NC74 664 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-207ENST00000481281 NELL1Q92832 810 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 CLIC5Q9NZA1 410 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
HDAC1-207ENST00000481281 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 CYP17A1P05093 508 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 SETSIPP0DME0 302 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 TDGF1P13385 188 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 NR1H3Q13133 447 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 NAIF1Q69YI7 327 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 PM20D1Q6GTS8 502 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 ALYREFQ86V81 257 aaKnown RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 ADGRG2Q8IZP9 1017 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 SPEM1Q8N4L4 309 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 P2RY13Q9BPV8 354 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 NACA2Q9H009 215 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 FBRSL1Q9HCM7 1045 aaKnown RBP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 NAGPAQ9UK23 515 aa13.72□□□□□ -0.21
HDAC1-207ENST00000481281 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC1-207ENST00000481281 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 GREM1O60565 184 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 PAPSS2O95340 614 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 TBX18O95935 607 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 MBD3O95983 291 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 RARGP13631 454 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 SLC9A1P19634 815 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 DRD1P21728 446 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 BRD2P25440 801 aaKnown RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 OPRD1P41143 372 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 GALK1P51570 392 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 CCR3P51677 355 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 TKTL1P51854 596 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 DHCR24Q15392 516 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 STILQ15468 1287 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 CNGA2Q16280 664 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 ZC3H14Q6PJT7 736 aaKnown RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 GBP6Q6ZN66 633 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 CREBRFQ8IUR6 639 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 SCML4Q8N228 414 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 KCTD13Q8WZ19 329 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 EZH1Q92800 747 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 CD101Q93033 1021 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 WBP2Q969T9 261 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 EXOC4Q96A65 974 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 FAM81BQ96LP2 452 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-207ENST00000481281 APEX2Q9UBZ4 518 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 SH3BP1Q9Y3L3 701 aa13.71□□□□□ -0.21
HDAC1-207ENST00000481281 PRR23AA6NEV1 266 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 MDM4O15151 490 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 ZBED1O96006 694 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms