RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	POT1	Q9NUX5	634 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	TMEM184C	Q9NVA4	438 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	ASIC5	Q9NY37	505 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	STK32B	Q9NY57	414 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	TFCP2L1	Q9NZI6	479 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	HEY2	Q9UBP5	337 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	AMFR	Q9UKV5	643 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	CFAP69	A5D8W1	941 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	CAPN8	A6NHC0	703 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173		H7C4K7	107 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	PSMD9	O00233	223 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	RGS10	O43665	173 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	SRGAP2	O75044	1071 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	PMPCB	O75439	489 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	RASAL1	O95294	804 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	FGA	P02671	866 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	PRKAR1B	P31321	381 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	GK	P32189	559 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	CCNI	Q14094	377 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	KRTAP27-1	Q3LI81	207 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	C3orf38	Q5JPI3	329 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	CACHD1	Q5VU97	1274 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	MTHFD1L	Q6UB35	978 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	ADAMTS18	Q8TE60	1221 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	RUNDC1	Q96C34	613 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	STK31	Q9BXU1	1019 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	C22orf23	Q9BZE7	217 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZNF518B	Q9C0D4	1074 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	A1CF	Q9NQ94	594 aa	Known RBP	3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	USP22	Q9UPT9	525 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	DRG1	Q9Y295	367 aa	Known RBP	3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	CDY1	Q9Y6F8	540 aa		3.98	□□□□□ -1.77
CCNL1-223	ENST00000481173	RASSF9	O75901	435 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	TOMM40	O96008	361 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	MYCL	P12524	364 aa	Predicted RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZKSCAN1	P17029	563 aa	Predicted RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	COPB1	P53618	953 aa	Known RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	BCAT1	P54687	386 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CNN3	Q15417	329 aa	Known RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CERCAM	Q5T4B2	595 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	UBAP2	Q5T6F2	1119 aa	Known RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	APOA5	Q6Q788	366 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	USP43	Q70EL4	1123 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	MICU3	Q86XE3	530 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CHPF	Q8IZ52	775 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	KIAA0319L	Q8IZA0	1049 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	KRT78	Q8N1N4	520 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	MAP4K1	Q92918	833 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CCDC17	Q96LX7	622 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CAMK1G	Q96NX5	476 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	PPP1R10	Q96QC0	940 aa	Known RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	FYTTD1	Q96QD9	318 aa	Known RBP	3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	CTAGE1	Q96RT6	745 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	TMEM60	Q9H2L4	133 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	PI4KB	Q9UBF8	816 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	L1RE1	Q9UN81	338 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZMYM2	Q9UBW7	1377 aa		3.97	□□□□□ -1.77
CCNL1-223	ENST00000481173		A6NNZ2	444 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	PYCARD-AS1	I3L0S3	204 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	MARCH6	O60337	910 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	HGF	P14210	728 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	BRAF	P15056	766 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	UQCRC1	P31930	480 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	CDKN2A	P42771	156 aa	Known RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	SUMO2	P61956	95 aa	Known RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	LMAN2	Q12907	356 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	ARHGAP29	Q52LW3	1261 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	ODR4	Q5SWX8	454 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	COLCA1	Q6ZS62	124 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173		Q6ZTC4	211 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	PNISR	Q8TF01	805 aa	Known RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	SPSB4	Q96A44	273 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	RSPRY1	Q96DX4	576 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	THOC3	Q96J01	351 aa	Known RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	PPP1R9B	Q96SB3	815 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	XPNPEP3	Q9NQH7	507 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	DNMT3B	Q9UBC3	853 aa	Known RBP	3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	HDAC9	Q9UKV0	1011 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	TPCN1	Q9ULQ1	816 aa		3.96	□□□□□ -1.78
CCNL1-223	ENST00000481173	LOC102723971	A0A1B0GUV8	181 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173		B4DGG1	531 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	PRSS44	E7EML9	344 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	RAB27B	O00194	218 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	RNF8	O76064	485 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	SCGB1D2	O95969	90 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	MT-CO3	P00414	261 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	CREB1	P16220	341 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	EPHA3	P29320	983 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	PTDSS1	P48651	473 aa	Known RBP	3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	DIO1	P49895	249 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	RHD	Q02161	417 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	ID2	Q02363	134 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	HYAL1	Q12794	435 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	SEC23B	Q15437	767 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	NPY5R	Q15761	445 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	INSC	Q1MX18	579 aa		3.95	□□□□□ -1.78
CCNL1-223	ENST00000481173	MINDY4	Q4G0A6	757 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms