RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 RARGP13631 454 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 ATP5C1P36542 298 aaKnown RBP21.21■□□□□ 0.99
VPS36-204ENST00000480923 NBL1P41271 181 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 CSTF1Q05048 431 aaKnown RBP21.21■□□□□ 0.99
VPS36-204ENST00000480923 GRSF1Q12849 480 aaKnown RBP eCLIP21.21■□□□□ 0.99
VPS36-204ENST00000480923 NFKBIBQ15653 356 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 HSP90AA4PQ58FG1 418 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 MAML2Q8IZL2 1156 aaPredicted RBP21.21■□□□□ 0.99
VPS36-204ENST00000480923 KIAA1958Q8N8K9 716 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 UBA3Q8TBC4 463 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 TFAP2BQ92481 460 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 EXOC4Q96A65 974 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 CHFRQ96EP1 664 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 KREMEN1Q96MU8 473 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 IER2Q9BTL4 223 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 UBE2TQ9NPD8 197 aaPredicted RBP21.21■□□□□ 0.99
VPS36-204ENST00000480923 CYLDQ9NQC7 956 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 FBXO4Q9UKT5 387 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 E2F8A0AVK6 867 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 TULP2O00295 520 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 TRDMT1O14717 391 aaKnown RBP21.2■□□□□ 0.98
VPS36-204ENST00000480923 XPO1O14980 1071 aaKnown RBP21.2■□□□□ 0.98
VPS36-204ENST00000480923 MBD3O95983 291 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 RALAP11233 206 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 KRT5P13647 590 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 BRD2P25440 801 aaKnown RBP21.2■□□□□ 0.98
VPS36-204ENST00000480923 PSEN1P49768 467 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 TKTL1P51854 596 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 MAN2A1Q16706 1144 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 CT47A1Q5JQC4 288 aaPredicted RBP21.2■□□□□ 0.98
VPS36-204ENST00000480923 TRIM65Q6PJ69 517 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 GBP6Q6ZN66 633 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 Q6ZS52 159 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 TADA2BQ86TJ2 420 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 P2RY13Q9BPV8 354 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 LRRC4Q9HBW1 653 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPS36-204ENST00000480923 TBC1D14Q9P2M4 693 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 NUDT5Q9UKK9 219 aa21.2■□□□□ 0.98
VPS36-204ENST00000480923 CALCAP01258 141 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 SETSIPP0DME0 302 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 SLC9A1P19634 815 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
VPS36-204ENST00000480923 GALK1P51570 392 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 MFAP3P55082 362 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 GOLGA8FQ08AF8 430 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 GOLGA8DPQ0D2H9 430 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 CCINQ13939 588 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 EXOC3L4Q17RC7 722 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 TMEM196Q5HYL7 178 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 RAB41Q5JT25 222 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 C10orf120Q5SQS8 335 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 NAIF1Q69YI7 327 aaPredicted RBP21.19■□□□□ 0.98
VPS36-204ENST00000480923 FSTL4Q6MZW2 842 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 LCLAT1Q6UWP7 414 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 RBM43Q6ZSC3 357 aaKnown RBP21.19■□□□□ 0.98
VPS36-204ENST00000480923 SCD5Q86SK9 330 aa21.19■□□□□ 0.98
VPS36-204ENST00000480923 PATJQ8NI35 1801 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 M0QYV0 167 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 MDM4O15151 490 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 CYP17A1P05093 508 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 PRKCSHP14314 528 aaPredicted RBP21.18■□□□□ 0.98
VPS36-204ENST00000480923 CCR3P51677 355 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 GAS6Q14393 721 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 DHCR24Q15392 516 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 STILQ15468 1287 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 CNGA2Q16280 664 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 GJB7Q6PEY0 223 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 TSSK4Q6SA08 328 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 SASS6Q6UVJ0 657 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 ENOSF1Q7L5Y1 443 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 ADGRG2Q8IZP9 1017 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 ARHGAP18Q8N392 663 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 SYNPOQ8N3V7 929 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 CD101Q93033 1021 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 FAM81BQ96LP2 452 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 ZSWIM1Q9BR11 485 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 TUBGCP2Q9BSJ2 902 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 KLF16Q9BXK1 252 aaPredicted RBP21.18■□□□□ 0.98
VPS36-204ENST00000480923 ULBP1Q9BZM6 244 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 PRMT8Q9NR22 394 aaPredicted RBP21.18■□□□□ 0.98
VPS36-204ENST00000480923 DNMT3LQ9UJW3 386 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.18■□□□□ 0.98
VPS36-204ENST00000480923 R4GN57 208 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 F5P12259 2224 aa21.18■□□□□ 0.98
VPS36-204ENST00000480923 GTPBP10A4D1E9 387 aaKnown RBP21.17■□□□□ 0.98
VPS36-204ENST00000480923 KCNJ18B7U540 433 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 PES1O00541 588 aaKnown RBP21.17■□□□□ 0.98
VPS36-204ENST00000480923 ZBED1O96006 694 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 DRD1P21728 446 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 PLA2G4AP47712 749 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 ZNF132P52740 706 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 YWHAGP61981 247 aaKnown RBP eCLIP21.17■□□□□ 0.98
VPS36-204ENST00000480923 APBA1Q02410 837 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 ADIGQ0VDE8 80 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 KCNJ12Q14500 433 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 PPP2R5DQ14738 602 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 ZNF528Q3MIS6 628 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 VWA3BQ502W6 1294 aa21.17■□□□□ 0.98
VPS36-204ENST00000480923 KLHDC10Q6PID8 442 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms