RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RHOBTB1O94844 696 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 RHOBTB3O94955 611 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 ZNF806P0C7X5 589 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 FAM200BP0CF97 657 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 TIE1P35590 1138 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 CREB5Q02930 508 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 MESP2Q0VG99 397 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 DPYDQ12882 1025 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 UNC93AQ86WB7 457 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 FAM186BQ8IYM0 893 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 CRYBG2Q8N1P7 616 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 ALLCQ8N6M5 410 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 ZFRQ96KR1 1074 aaKnown RBP16.13■□□□□ 0.17
LIMS3-203ENST00000480744 FBXO44Q9H4M3 255 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
LIMS3-203ENST00000480744 MMP17Q9ULZ9 603 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 PCDHGA5Q9Y5G8 931 aa16.13■□□□□ 0.17
LIMS3-203ENST00000480744 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 KLF8O95600 359 aaPredicted RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 ZDHHC11BP0C7U3 371 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 CD58P19256 250 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 RPL13P26373 211 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 TUBP50607 506 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 MRPS21P82921 87 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 GAD2Q05329 585 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 PPP3CAQ08209 521 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 ANO4Q32M45 955 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 USP39Q53GS9 565 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 SNX30Q5VWJ9 437 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 BTBD8Q5XKL5 378 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 INTS8Q75QN2 995 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 BBS7Q8IWZ6 715 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 NAT16Q8N8M0 369 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 TXNDC5Q8NBS9 432 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 TAS1R2Q8TE23 839 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 OTUB2Q96DC9 234 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 TWNKQ96RR1 684 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 ZDHHC4Q9NPG8 344 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
LIMS3-203ENST00000480744 RXFP3Q9NSD7 469 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 IL37Q9NZH6 218 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 ATP6V1DQ9Y5K8 247 aa16.12■□□□□ 0.17
LIMS3-203ENST00000480744 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 FAM92AA1XBS5 289 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 MAPK13O15264 365 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 TLR5O60602 858 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 EIF2DP41214 584 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 GRIA2P42262 883 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 PGFP49763 221 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 ADAM9Q13443 819 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CRY1Q16526 586 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 PLA2G2CQ5R387 149 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 EMC10Q5UCC4 262 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 GPRIN1Q7Z2K8 1008 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 GUF1Q8N442 669 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CCDC150Q8NCX0 1101 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 MDGA1Q8NFP4 955 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 WBP2Q969T9 261 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 GDPD2Q9HCC8 539 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CSNK1G1Q9HCP0 422 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CEP192Q8TEP8 1941 aa16.11■□□□□ 0.17
LIMS3-203ENST00000480744 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
LIMS3-203ENST00000480744 A0A1W2PQ27 194 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 A0A1W2PQ64 194 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 A0A1W2PQD8 194 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 SGK1O00141 431 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 CYP26A1O43174 497 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 ALDH1A2O94788 518 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 ZNF202O95125 648 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 TBX18O95935 607 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 HNRNPLP14866 589 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIMS3-203ENST00000480744 ACO1P21399 889 aaKnown RBP16.1■□□□□ 0.17
LIMS3-203ENST00000480744 INCA1Q0VD86 236 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 NFIL3Q16649 462 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 EOGTQ5NDL2 527 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 STPG1Q5TH74 334 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 TMEM92Q6UXU6 159 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 CLEC20AQ6ZU45 233 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 RASSF3Q86WH2 238 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 IL17RCQ8NAC3 791 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 HNRNPABQ99729 332 aaKnown RBP16.1■□□□□ 0.17
LIMS3-203ENST00000480744 CYP3A43Q9HB55 503 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 SPHK2Q9NRA0 654 aa16.1■□□□□ 0.17
LIMS3-203ENST00000480744 PLXND1Q9Y4D7 1925 aa16.09■□□□□ 0.17
LIMS3-203ENST00000480744 TBC1D3BA6NDS4 549 aa16.09■□□□□ 0.17
LIMS3-203ENST00000480744 TULP3O75386 442 aa16.09■□□□□ 0.17
LIMS3-203ENST00000480744 CAVIN2O95810 425 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms