RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GRIA2P42262 883 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 DGKEP52429 567 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CACNA2D1P54289 1103 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 DHCR24Q15392 516 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 STILQ15468 1287 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 ELF2Q15723 593 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CLEC20AQ6ZU45 233 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 PAQR9Q6ZVX9 377 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 KIAA2013Q8IYS2 634 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 RPLP0P6Q8NHW5 317 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 DDX1Q92499 740 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 FAM81BQ96LP2 452 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 SDCBP2Q9H190 292 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CISHQ9NSE2 258 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 WDR35Q9P2L0 1181 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 DNMT3LQ9UJW3 386 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 COQ4Q9Y3A0 265 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 HOXC11O43248 304 aaPredicted RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 RHOBTB1O94844 696 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 ADORA2BP29275 332 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 DPP6P42658 865 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 TNFRSF4P43489 277 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 PLA2G4AP47712 749 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 FNTBP49356 437 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 BCAT1P54687 386 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 ZNF445P59923 1031 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 COG7P83436 770 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 CUL2Q13617 745 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 EOGTQ5NDL2 527 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 ARHGAP17Q68EM7 881 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 SPOPLQ6IQ16 392 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 C12orf29Q8N999 325 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 TSTD1Q8NFU3 115 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 SCAMP5Q8TAC9 235 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 RIN3Q8TB24 985 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 HEXIM2Q96MH2 286 aaKnown RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 SMOQ99835 787 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 APOBEC3GQ9HC16 384 aaKnown RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 POLMQ9NP87 494 aaPredicted RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 OLA1Q9NTK5 396 aaKnown RBP12.07□□□□□ -0.48
CCM2-213ENST00000480658 TMEM30AQ9NV96 361 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 SMPD4Q9NXE4 827 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 GMIPQ9P107 970 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 HMGXB4Q9UGU5 601 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 STRIP2Q9ULQ0 834 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
CCM2-213ENST00000480658 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 ANAPC1Q9H1A4 1944 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 A0A0A0MRY4 1105 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 NPC1O15118 1278 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 AXIN1O15169 862 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 KAT7O95251 611 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 CHKAP35790 457 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 KIF11P52732 1056 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 DMC1Q14565 340 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 CSRP2Q16527 193 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 CCDC40Q4G0X9 1142 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
CCM2-213ENST00000480658 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 HTR3DQ70Z44 454 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 DGLUCYQ7Z3D6 616 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
CCM2-213ENST00000480658 ANKRD52Q8NB46 1076 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 ZMIZ2Q8NF64 920 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 NETO1Q8TDF5 533 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 SLC35C1Q96A29 364 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 JAKMIP2Q96AA8 810 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 CHFRQ96EP1 664 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 ZC3H10Q96K80 434 aaKnown RBP12.06□□□□□ -0.48
CCM2-213ENST00000480658 SPACA7Q96KW9 195 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 RTKNQ9BST9 563 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 TRIM62Q9BVG3 475 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 SPHK2Q9NRA0 654 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 DEC1Q9P2X7 70 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
CCM2-213ENST00000480658 MMP17Q9ULZ9 603 aa12.06□□□□□ -0.48
CCM2-213ENST00000480658 F5P12259 2224 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 PAEPP09466 180 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 OPRD1P41143 372 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 PAK1Q13153 545 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 C10orf120Q5SQS8 335 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 ANKRD40Q6AI12 368 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 SDE2Q6IQ49 451 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 ZNF557Q8N988 423 aaPredicted RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 USP33Q8TEY7 942 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms