RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
ATG4B-218ENST00000479554 AXIN1O15169 862 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
ATG4B-218ENST00000479554 ADH5P11766 374 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 CD58P19256 250 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 EIF2DP41214 584 aaKnown RBP15.15■□□□□ 0.02
ATG4B-218ENST00000479554 PNOCQ13519 176 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 CSRP2Q16527 193 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 KRT39Q6A163 491 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 PRR23CQ6ZRP0 262 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 OTUB2Q96DC9 234 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 HNRNPABQ99729 332 aaKnown RBP15.15■□□□□ 0.02
ATG4B-218ENST00000479554 TLR8Q9NR97 1041 aaKnown RBP15.15■□□□□ 0.02
ATG4B-218ENST00000479554 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
ATG4B-218ENST00000479554 MED19A0JLT2 244 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-218ENST00000479554 K7EQS6 105 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 CETN3O15182 167 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 FOXD2O60548 495 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-218ENST00000479554 TLR5O60602 858 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 IRF1P10914 325 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 GTF2H1P32780 548 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 MXI1P50539 228 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 ATXN1P54253 815 aaKnown RBP15.14■□□□□ 0.01
ATG4B-218ENST00000479554 C2orf27AQ580R0 203 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 CLEC20AQ6ZU45 233 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 GPRIN1Q7Z2K8 1008 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 KBTBD6Q86V97 674 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-218ENST00000479554 TSTD1Q8NFU3 115 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 CYFIP2Q96F07 1278 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 LOXL4Q96JB6 756 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 PNKPQ96T60 521 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 RTKNQ9BST9 563 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 EBF1Q9UH73 591 aa15.14■□□□□ 0.01
ATG4B-218ENST00000479554 MYH10P35580 1976 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-218ENST00000479554 CYP26A1O43174 497 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 STX10O60499 249 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 CILPO75339 1184 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 EPN2O95208 641 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 APODP05090 189 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 LAMA1P25391 3075 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 DGKEP52429 567 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 ZNF445P59923 1031 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 GAD2Q05329 585 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 KDSRQ06136 332 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 ZSCAN23Q3MJ62 389 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 LY6G5CQ5SRR4 150 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 CCDC183Q5T5S1 534 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 C12orf40Q86WS4 652 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 BBS7Q8IWZ6 715 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 NETO1Q8TDF5 533 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 EEF2KMTQ96G04 330 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 TSG101Q99816 390 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 ARRDC1-AS1Q9H2J1 176 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 PNPLA8Q9NP80 782 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 ARHGEF4Q9NR80 690 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 MMP17Q9ULZ9 603 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 SCML2Q9UQR0 700 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 EML5Q05BV3 1969 aa15.13■□□□□ 0.01
ATG4B-218ENST00000479554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-218ENST00000479554 HHLA1C9JL84 531 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 KAT7O95251 611 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 SMC2O95347 1197 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 ACO1P21399 889 aaKnown RBP15.12■□□□□ 0.01
ATG4B-218ENST00000479554 PRCPP42785 496 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 SLC6A11P48066 632 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 PGFP49763 221 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 MRPS21P82921 87 aaKnown RBP15.12■□□□□ 0.01
ATG4B-218ENST00000479554 GOLGA8FQ08AF8 430 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 GOLGA8DPQ0D2H9 430 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 ZNF394Q53GI3 561 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-218ENST00000479554 BTBD8Q5XKL5 378 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 FBXL13Q8NEE6 735 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 SEMA4DQ92854 862 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 GSDMAQ96QA5 445 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 DUSP9Q99956 384 aaKnown RBP15.12■□□□□ 0.01
ATG4B-218ENST00000479554 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
ATG4B-218ENST00000479554 ANTXRLA6NF34 631 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 HOXC11O43248 304 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 TIE1P35590 1138 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 ATP5C1P36542 298 aaKnown RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 GRIA2P42262 883 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 MESP2Q0VG99 397 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 ELF2Q15723 593 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 CCDC6Q16204 474 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 PLK5Q496M5 336 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 AASDHQ4L235 1098 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 COBLL1Q53SF7 1204 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms