RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
RFC4-212ENST00000479307 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.9□□□□□ -1.46
RFC4-212ENST00000479307 CDY1Q9Y6F8 540 aa5.9□□□□□ -1.46
RFC4-212ENST00000479307 PARP4Q9UKK3 1724 aaKnown RBP5.89□□□□□ -1.47
RFC4-212ENST00000479307 A0A087WV62 115 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 A0A0B4J269 797 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 TMEM200CA6NKL6 621 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 F5H697 171 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 RAB27BO00194 218 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 CD6P30203 668 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 PTGS2P35354 604 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 COPAP53621 1224 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 SLC25A3Q00325 362 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 ICA1Q05084 483 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 MYO1EQ12965 1108 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 TUBB3Q13509 450 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 E2F2Q14209 437 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 DHX8Q14562 1220 aaKnown RBP5.89□□□□□ -1.47
RFC4-212ENST00000479307 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
RFC4-212ENST00000479307 PRR16Q569H4 304 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 PGBD2Q6P3X8 592 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 MZT2AQ6P582 158 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 SYNE4Q8N205 404 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 FAM109AQ8N4B1 249 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 LRRC46Q96FV0 321 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 GDF15Q99988 308 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 PTPRHQ9HD43 1115 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 TBC1D23Q9NUY8 699 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
RFC4-212ENST00000479307 DKK4Q9UBT3 224 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 MAGED2Q9UNF1 606 aaPredicted RBP5.89□□□□□ -1.47
RFC4-212ENST00000479307 MAN2B2Q9Y2E5 1009 aa5.89□□□□□ -1.47
RFC4-212ENST00000479307 ALS2Q96Q42 1657 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 TRPM3Q9HCF6 1732 aaPredicted RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 TRGV11A0A075B6L2 103 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 GOLGA6L3A6NEY3 463 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 H7C4K7 107 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 PLSCR1O15162 318 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 FFAR2O15552 330 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 KCNQ3O43525 872 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 NDUFA10O95299 355 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 NR4A1P22736 598 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 GRM1Q13255 1194 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ZRSR2Q15696 482 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 NPY5RQ15761 445 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 PDCD2Q16342 344 aaPredicted RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 GPR162Q16538 588 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 NRN1LQ496H8 165 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ICE2Q659A1 982 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 PLAG1Q6DJT9 500 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 FCRL6Q6DN72 434 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 FBXO38Q6PIJ6 1188 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ZNF280BQ86YH2 543 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ZNF527Q8NB42 609 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 BPIFB1Q8TDL5 484 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 LENG9Q96B70 501 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ZNF668Q96K58 619 aaPredicted RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 SNX27Q96L92 541 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 PLEKHG4BQ96PX9 1271 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ADAM2Q99965 735 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 CHMP4AQ9BY43 222 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 ZCWPW1Q9H0M4 648 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 UNKLQ9H9P5 680 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 NECTIN3Q9NQS3 549 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 NDRG4Q9ULP0 352 aaKnown RBP5.88□□□□□ -1.47
RFC4-212ENST00000479307 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 TOPAZ1Q8N9V7 1692 aa5.88□□□□□ -1.47
RFC4-212ENST00000479307 KCNA3P22001 575 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 GUCY1B3Q02153 619 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 ZNF750Q32MQ0 723 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 ZIK1Q3SY52 487 aaPredicted RBP5.87□□□□□ -1.47
RFC4-212ENST00000479307 TIGD2Q4W5G0 525 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 RBM20Q5T481 1227 aaKnown RBP5.87□□□□□ -1.47
RFC4-212ENST00000479307 ARHGAP40Q5TG30 622 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 RRAGBQ5VZM2 374 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 ARHGEF19Q8IW93 802 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 RRP7BPQ9NSQ0 103 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 GJB4Q9NTQ9 266 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 SBNO1A3KN83 1393 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 ARHGEF10O15013 1369 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 DAPK1P53355 1430 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 TNS2Q63HR2 1409 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 PAPPAQ13219 1627 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 IFT172Q9UG01 1749 aa5.87□□□□□ -1.47
RFC4-212ENST00000479307 RGPD8O14715 1765 aaPredicted RBP5.87□□□□□ -1.47
RFC4-212ENST00000479307 QSER1Q2KHR3 1735 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 ARHGEF28Q8N1W1 1705 aaKnown RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 NAIPQ13075 1403 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 SPATA31A1Q5TZJ5 1347 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 A0A087WZ62 844 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms