RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, human

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL4A2-205	ENST00000478681	NT5C1A	Q9BXI3	368 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	IMPG2	Q9BZV3	1241 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	NIF3L1	Q9GZT8	377 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	CCSER2	Q9H7U1	834 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	PNPLA8	Q9NP80	782 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	FAM49B	Q9NUQ9	324 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	SCML2	Q9UQR0	700 aa		13.85	□□□□□ -0.19
COL4A2-205	ENST00000478681	CEP295	Q9C0D2	2601 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	PI4KA	P42356	2102 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	AXIN1	O15169	862 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	GREM1	O60565	184 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	APBB3	O95704	486 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	FAM200B	P0CF97	657 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	PRCP	P42785	496 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	SLC6A11	P48066	632 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	ATXN1	P54253	815 aa	Known RBP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	MESP2	Q0VG99	397 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	DMC1	Q14565	340 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	SEMA4D	Q92854	862 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	HHIP	Q96QV1	700 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	CYLD	Q9NQC7	956 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	TLR8	Q9NR97	1041 aa	Known RBP	13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	SEMA4G	Q9NTN9	838 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	RMND1	Q9NWS8	449 aa		13.84	□□□□□ -0.19
COL4A2-205	ENST00000478681	NUP205	Q92621	2012 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	ANTXRL	A6NF34	631 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	SCAMP3	O14828	347 aa	Known RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	CETN3	O15182	167 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	FOXD2	O60548	495 aa	Predicted RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	TLR5	O60602	858 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	ADH1C	P00326	375 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	TRIM21	P19474	475 aa	Known RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	ADORA2B	P29275	332 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	NUCB2	P80303	420 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	MRPS21	P82921	87 aa	Known RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	BECN1	Q14457	450 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	LY6G5C	Q5SRR4	150 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	HTR3D	Q70Z44	454 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	GPRIN1	Q7Z2K8	1008 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	KBTBD6	Q86V97	674 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	C12orf40	Q86WS4	652 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	PHTF2	Q8N3S3	785 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	FBXL13	Q8NEE6	735 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	WBP2	Q969T9	261 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	EEF2KMT	Q96G04	330 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	PNKP	Q96T60	521 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	KLF16	Q9BXK1	252 aa	Predicted RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	OSER1	Q9NX31	292 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	THADA	Q6YHU6	1953 aa		13.83	□□□□□ -0.2
COL4A2-205	ENST00000478681	HOXC11	O43248	304 aa	Predicted RBP	13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	STX10	O60499	249 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	TBX18	O95935	607 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	EPB41	P11171	864 aa	Known RBP	13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	ADH5	P11766	374 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	CD58	P19256	250 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	GRIA2	P42262	883 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	TNFRSF4	P43489	277 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	MXI1	P50539	228 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	KIF11	P52732	1056 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	PLK5	Q496M5	336 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	C2orf27A	Q580R0	203 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	KLHDC10	Q6PID8	442 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	PRR23C	Q6ZRP0	262 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	RASSF3	Q86WH2	238 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	SFTPA1	Q8IWL2	248 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	BBS7	Q8IWZ6	715 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	ETFBKMT	Q8IXQ9	262 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	ZNF276	Q8N554	614 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	TTC39C	Q8N584	583 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	CCDC150	Q8NCX0	1101 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	TIGD1	Q96MW7	591 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	RTKN	Q9BST9	563 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	DUSP16	Q9BY84	665 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	MMRN2	Q9H8L6	949 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	RAB20	Q9NX57	234 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	CDV3	Q9UKY7	258 aa	Known RBP	13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	MMP17	Q9ULZ9	603 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	COQ4	Q9Y3A0	265 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	SH3BP1	Q9Y3L3	701 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	PCDHA5	Q9Y5H7	936 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	USP3	Q9Y6I4	520 aa		13.82	□□□□□ -0.2
COL4A2-205	ENST00000478681	MED19	A0JLT2	244 aa	Predicted RBP	13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	GOLGA6L4	A6NEF3	574 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	SLC16A3	O15427	465 aa	Known RBP	13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	CYP26A1	O43174	497 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	EPN2	O95208	641 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	KAT7	O95251	611 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	SMC2	O95347	1197 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	APOD	P05090	189 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	ZNF806	P0C7X5	589 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	CCDC192	P0DO97	292 aa		13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	ACO1	P21399	889 aa	Known RBP	13.81	□□□□□ -0.2
COL4A2-205	ENST00000478681	ATP5C1	P36542	298 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms