RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 HSCBQ8IWL3 235 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 TAB3Q8N5C8 712 aaPredicted RBP6.87□□□□□ -1.31
HOXB3-209ENST00000478644 IGSF22Q8N9C0 903 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 PIGOQ8TEQ8 1089 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 ATOH1Q92858 354 aaPredicted RBP6.87□□□□□ -1.31
HOXB3-209ENST00000478644 NELL2Q99435 816 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 NTPCRQ9BSD7 190 aaKnown RBP6.87□□□□□ -1.31
HOXB3-209ENST00000478644 CCDC94Q9BW85 323 aaPredicted RBP6.87□□□□□ -1.31
HOXB3-209ENST00000478644 KCNK12Q9HB15 430 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 MAN1C1Q9NR34 630 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 RAPGEFL1Q9UHV5 662 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 FBXL21Q9UKT6 434 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 G3BP2Q9UN86 482 aaKnown RBP6.87□□□□□ -1.31
HOXB3-209ENST00000478644 ATG2AQ2TAZ0 1938 aa6.87□□□□□ -1.31
HOXB3-209ENST00000478644 CLUHO75153 1309 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 H7C4K7 107 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 SYN3O14994 580 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 NCAM2O15394 837 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 XPOTO43592 962 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 MED24O75448 989 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 NPTXRO95502 500 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 PRKCBP05771 671 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 TMEM253P0C7T8 217 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 AOC1P19801 751 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 CCT6AP40227 531 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 NBL1P41271 181 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 PCBP3P57721 371 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 POU5F1Q01860 360 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 STRN3Q13033 797 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 DMP1Q13316 513 aaPredicted RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 SNW1Q13573 536 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 IL17AQ16552 155 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 C1orf228Q6PIY5 440 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 ZC3H14Q6PJT7 736 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 TMC5Q6UXY8 1006 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 LEMD2Q8NC56 503 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 GSTCDQ8NEC7 633 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 SMG7Q92540 1137 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 KCNN1Q92952 543 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 E2F7Q96AV8 911 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 CPB2Q96IY4 423 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 AK8Q96MA6 479 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 EIF2AQ9BY44 585 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 MRPL4Q9BYD3 311 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 OSBPL6Q9BZF3 934 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 GPR88Q9GZN0 384 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 PRDM14Q9GZV8 571 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 ZSCAN16Q9H4T2 348 aaPredicted RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 ZNF552Q9H707 407 aaPredicted RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 PLEKHA5Q9HAU0 1116 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 MARCH5Q9NX47 278 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 LARSQ9P2J5 1176 aaKnown RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 TCFL5Q9UL49 500 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 MTMR6Q9Y217 621 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 TNFSF13BQ9Y275 285 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 PRG3Q9Y2Y8 225 aaPredicted RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 BACE2Q9Y5Z0 518 aa6.86□□□□□ -1.31
HOXB3-209ENST00000478644 MORC2Q9Y6X9 1032 aaPredicted RBP6.86□□□□□ -1.31
HOXB3-209ENST00000478644 VPS37CA5D8V6 355 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ZNF197O14709 1029 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 TGM5O43548 720 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 STX6O43752 255 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 PSPNO60542 156 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 MCF2P10911 925 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 IMPDH2P12268 514 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 LAMP2P13473 410 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 AKAP5P24588 427 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 GUCY2CP25092 1073 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ELF1P32519 619 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 MCM4P33991 863 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 RESTQ13127 1097 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 RAB33AQ14088 237 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 PSMD5Q16401 504 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 LONRF3Q496Y0 759 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 XKR4Q5GH76 650 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 PPM1LQ5SGD2 360 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ATF7IP2Q5U623 682 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 TPGS2Q68CL5 300 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 TMEM173Q86WV6 379 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 CD302Q8IX05 232 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ELMOD1Q8N336 334 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 APPL2Q8NEU8 664 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ZNF461Q8TAF7 563 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 AUTS2Q8WXX7 1259 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 RIN2Q8WYP3 895 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 CDK5RAP3Q96JB5 506 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 MAP6Q96JE9 813 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 ACAP3Q96P50 834 aa6.85□□□□□ -1.31
HOXB3-209ENST00000478644 SRPK1Q96SB4 655 aaKnown RBP6.85□□□□□ -1.31
HOXB3-209ENST00000478644 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms