RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CPQQ9Y646 472 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 MUC6Q6W4X9 2439 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 FAM92AA1XBS5 289 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 TMEM221A6NGB7 291 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 M0R296 226 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 COCHO43405 550 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 TBX18O95935 607 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 ZBED1O96006 694 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 PDGFBP01127 241 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-215ENST00000478531 IRF1P10914 325 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 UBASH3AP57075 661 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 RAB41Q5JT25 222 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 C10orf120Q5SQS8 335 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-215ENST00000478531 TRIM67Q6ZTA4 783 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 RSRC2Q7L4I2 434 aaKnown RBP7.25□□□□□ -1.25
BRCA1-215ENST00000478531 CCDC186Q7Z3E2 898 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 MFSD6LQ8IWD5 586 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 PIP4P2Q8N4L2 257 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 C1orf131Q8NDD1 294 aaKnown RBP7.25□□□□□ -1.25
BRCA1-215ENST00000478531 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 RIN3Q8TB24 985 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 BPIFB1Q8TDL5 484 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 SH3RF2Q8TEC5 729 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 CLEC4CQ8WTT0 213 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 DEPDC1BQ8WUY9 529 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 SPOCK2Q92563 424 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 MIS12Q9H081 205 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 RNF38Q9H0F5 515 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 MFSD1Q9H3U5 465 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 KIF9Q9HAQ2 790 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 NMUR1Q9HB89 426 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 OSER1Q9NX31 292 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 IFNKQ9P0W0 207 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 CYTH4Q9UIA0 394 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF318Q5VUA4 2279 aa7.25□□□□□ -1.25
BRCA1-215ENST00000478531 LEFTY2O00292 366 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 STK25O00506 426 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF263O14978 683 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 MDM4O15151 490 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZDHHC11BP0C7U3 371 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 RARGP13631 454 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 CYP11B1P15538 503 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 WEE1P30291 646 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SOX5P35711 763 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 GPD2P43304 727 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 JAM2P57087 298 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 BPIFB4P59827 614 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 YWHAGP61981 247 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 TNK2Q07912 1038 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 USP4Q13107 963 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 PDCLQ13371 301 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 MTF1Q14872 753 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF77Q15935 545 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 IER5LQ5T953 404 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 TRIM68Q6AZZ1 485 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SCD5Q86SK9 330 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 NOP9Q86U38 636 aaKnown RBP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 MIB1Q86YT6 1006 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SLC20A1Q8WUM9 679 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SLC35F5Q8WV83 523 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 IRF7Q92985 503 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ASIC4Q96FT7 647 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 UBXN6Q9BZV1 441 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SYNCQ9H7C4 482 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 C11orf16Q9NQ32 467 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ARHGEF3Q9NR81 526 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SLC2A4RGQ9NR83 387 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 HEBP1Q9NRV9 189 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 THG1LQ9NWX6 298 aaKnown RBP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ARHGAP26Q9UNA1 814 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 CEP83Q9Y592 693 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ATG2BQ96BY7 2078 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 KMT2EQ8IZD2 1858 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 YJEFN3A6XGL0 299 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 E5RJQ4 531 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 E7ENQ6 273 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 HMBSP08397 361 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 RALAP11233 206 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 STAT1P42224 750 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 TUBP50607 506 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF445P59923 1031 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SLC7A9P82251 487 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZXDBP98169 803 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 PFKPQ01813 784 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 FCHO2Q0JRZ9 810 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 EFEMP1Q12805 493 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF268Q14587 947 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ARHGAP29Q52LW3 1261 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 TMEM31Q5JXX7 168 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SNX30Q5VWJ9 437 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 BTBD8Q5XKL5 378 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 HFE2Q6ZVN8 426 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 ARHGAP18Q8N392 663 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 FLCNQ8NFG4 579 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 CSGALNACT1Q8TDX6 532 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 EPS8L1Q8TE68 723 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 KCTD13Q8WZ19 329 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms