RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TRPM4Q8TD43 1214 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CPT1BQ92523 772 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 NMD3Q96D46 503 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 MTBPQ96DY7 904 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 OTUD5Q96G74 571 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 PHF12Q96QT6 1004 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 NTPCRQ9BSD7 190 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 CADM1Q9BY67 442 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 RNPEPQ9H4A4 650 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ARHGAP28Q9P2N2 729 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 NUMBLQ9Y6R0 609 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 SIPA1L1O43166 1804 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 QSER1Q2KHR3 1735 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 PEX11AO75192 247 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ASMTLO95671 621 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ATP4AP20648 1035 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 SERPINB5P36952 375 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 NAMPTP43490 491 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 TGFB2P61812 414 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ZNF268Q14587 947 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 PPM1JQ5JR12 505 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 LRRC43Q8N309 656 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 TEX9Q8N6V9 391 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 RXFP2Q8WXD0 754 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 AZIN2Q96A70 460 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 SYT15Q9BQS2 421 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 VCXQ9H320 206 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 USP18Q9UMW8 372 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 C2CD2Q9Y426 696 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 BRWD3Q6RI45 1802 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 PRR5-ARHGAP8B1AHC4 643 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 GRIN3BO60391 1043 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 DNAJC6O75061 913 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ZC3H11AO75152 810 aaKnown RBP eCLIP10.15□□□□□ -0.78
CMC1-209ENST00000477739 NFICP08651 508 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 SKIP12755 728 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 TBXAS1P24557 533 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 MLH1P40692 756 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 HADHBP55084 474 aaKnown RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 ARHGAP8P85298 464 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 FOXD4Q12950 439 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 CCDC142Q17RM4 750 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 GEN1Q17RS7 908 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 WLSQ5T9L3 541 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 RASSF3Q86WH2 238 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 CRLF3Q8IUI8 442 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 PPIL6Q8IXY8 311 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 CCNYL1Q8N7R7 359 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 CCHCR1Q8TD31 782 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 RNF34Q969K3 372 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 ABTB1Q969K4 478 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 ZBED3Q96IU2 234 aaPredicted RBP10.15□□□□□ -0.78
CMC1-209ENST00000477739 NSL1Q96IY1 281 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 TWNKQ96RR1 684 aa10.15□□□□□ -0.78
CMC1-209ENST00000477739 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 SPECC1L-ADORA2AF8WAN1 911 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 TP73O15350 636 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 CCDC22O60826 627 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 CALB1P05937 261 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 ABCD1P33897 745 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 MAP3K10Q02779 954 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 RALGPS1Q5JS13 557 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 TAS1R3Q7RTX0 852 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 CTU1Q7Z7A3 348 aaKnown RBP10.15□□□□□ -0.79
CMC1-209ENST00000477739 CMC1Q7Z7K0 106 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.799e-8■■■■□ 20.1
CMC1-209ENST00000477739 MPP5Q8N3R9 675 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 PAF1Q8N7H5 531 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 MPHOSPH6Q99547 160 aaKnown RBP10.15□□□□□ -0.79
CMC1-209ENST00000477739 MIPEPQ99797 713 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 MRPL4Q9BYD3 311 aaKnown RBP10.15□□□□□ -0.79
CMC1-209ENST00000477739 PORCNQ9H237 461 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 ARHGEF3Q9NR81 526 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 PGAP2Q9UHJ9 254 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 MFHAS1Q9Y4C4 1052 aa10.15□□□□□ -0.79
CMC1-209ENST00000477739 hCG_1818297A0A087WSY0 165 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 A0A0B4J269 797 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 TBX10O75333 385 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 LRCH4O75427 683 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 TPBGLP0DKB5 382 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 UBA1P22314 1058 aaKnown RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 RANBP1P43487 201 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 PSEN1P49768 467 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 ZNF280AP59817 542 aaPredicted RBP10.14□□□□□ -0.79
CMC1-209ENST00000477739 CAV1Q03135 178 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 USP4Q13107 963 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 CYTH1Q15438 398 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
CMC1-209ENST00000477739 ZNF677Q86XU0 584 aa10.14□□□□□ -0.79
CMC1-209ENST00000477739 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms