RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TMEM175Q9BSA9 504 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 KLC2Q9H0B6 622 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 DSEQ9UL01 958 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 SZT2Q5T011 3432 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 TRIM43BA6NCK2 446 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 DAPK3O43293 454 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 ZNF683Q8IZ20 524 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 RBM41Q96IZ5 413 aaKnown RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 RUNDC3BQ96NL0 473 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 KLHL11Q9NVR0 708 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 ODC1P11926 461 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 KRT10P13645 584 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 MAGEA6P43360 314 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 DPYSQ14117 519 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 SYPL2Q5VXT5 272 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 PSTKQ8IV42 348 aaKnown RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 IRGQQ8WZA9 623 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 PCDH18Q9HCL0 1135 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 WHRNQ9P202 907 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 KIAA0355O15063 1070 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 BFSP2Q13515 415 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 MANEALQ5VSG8 457 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 HIBCHQ6NVY1 386 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 TMCO3Q6UWJ1 677 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 PCDH19Q8TAB3 1148 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 TBCBQ99426 244 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-203ENST00000477626 SNX25Q9H3E2 840 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
PRPF39-203ENST00000477626 PIK3R2O00459 728 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SYN3O14994 580 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 RRP9O43818 475 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SLC10A2Q12908 348 aaPredicted RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 CNGB3Q9NQW8 809 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 OSER1Q9NX31 292 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 E7ENQ6 273 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 GOLGA8SH3BPF8 625 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 ADORA2BP29275 332 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 HOXC13P31276 330 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 GDF10P55107 478 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 ADIGQ0VDE8 80 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 KCNT1Q5JUK3 1230 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 HDXQ7Z353 690 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SCD5Q86SK9 330 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 C1orf54Q8WWF1 131 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 GORASP1Q9BQQ3 440 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 GPR62Q9BZJ7 368 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 RANBP2P49792 3224 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 HSF2BPO75031 334 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 C1QAP02745 245 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 KRT7P08729 469 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 KCNJ1P48048 391 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SLC11A1P49279 550 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 SMARCD1Q96GM5 515 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 KCTD15Q96SI1 283 aaPredicted RBP12.68□□□□□ -0.38
PRPF39-203ENST00000477626 ZNF670Q9BS34 389 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 MIS12Q9H081 205 aa12.68□□□□□ -0.38
PRPF39-203ENST00000477626 PI4K2BG5E9Z4 385 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 ZDHHC11BP0C7U3 371 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 VCPP55072 806 aaKnown RBP12.67□□□□□ -0.38
PRPF39-203ENST00000477626 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 TAS1R1Q7RTX1 841 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
PRPF39-203ENST00000477626 FAM172AQ8WUF8 416 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 NTAN1Q96AB6 310 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 PLAC1Q9HBJ0 212 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 PIGVQ9NUD9 493 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 COL4A3Q01955 1670 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms