RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 LRFN2Q9ULH4 789 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 MFHAS1Q9Y4C4 1052 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 CEP290O15078 2479 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 XPO1O14980 1071 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 INPPL1O15357 1258 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 ADAM12O43184 909 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 PSTPIP1O43586 416 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 CSPG5O95196 566 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 TRUB2O95900 331 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 FAM200BP0CF97 657 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 ZSCAN5DPP0CG00 497 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 ZNF16P17020 682 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 GGCXP38435 758 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 LHX1P48742 406 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 DMTNQ08495 405 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 PRSS55Q6UWB4 352 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 BHLHA9Q7RTU4 235 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 YY1AP1Q9H869 796 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 LRRC4CQ9HCJ2 640 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 PDE4DIPQ5VU43 2346 aa12.38□□□□□ -0.43
TNRC6A-206ENST00000477487 TADA2AO75478 443 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 TUBBP07437 444 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 SKIP12755 728 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 MAN1A1P33908 653 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CDKN2BP42772 138 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 TNNT3P45378 269 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 DR1Q01658 176 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 FAM171BQ6P995 826 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 FAM131BQ86XD5 332 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 JAMLQ86YT9 394 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 URGCPQ8TCY9 931 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 FAM193BQ96PV7 902 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 UBN1Q9NPG3 1134 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 WDR35Q9P2L0 1181 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 TARSL2A2RTX5 802 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 MAP2K7O14733 419 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 PHF2O75151 1096 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CXCL10P02778 98 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CYP11A1P05108 521 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 COILP38432 576 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 YWHAHQ04917 246 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 STILQ15468 1287 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 DDR2Q16832 855 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 HDXQ7Z353 690 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 RIN2Q8WYP3 895 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 FTHL17Q9BXU8 183 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 SLC27A5Q9Y2P5 690 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 XIRP2A4UGR9 3374 aa12.37□□□□□ -0.43
TNRC6A-206ENST00000477487 hCG_1818297A0A087WSY0 165 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 C2CD2LO14523 706 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 PARNO95453 639 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 GALTP07902 379 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 PECAM1P16284 738 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 RPL34P49207 117 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 OTOP2Q7RTS6 562 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 EXD1Q8NHP7 514 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 ARMC5Q96C12 935 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 CNPY3Q9BT09 278 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 DCLK3Q9C098 648 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 DNPEPQ9ULA0 475 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 CLTBP09497 229 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 KDELR1P24390 212 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 FNIP1Q8TF40 1166 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 PIK3R5Q8WYR1 880 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 PTPRSQ13332 1948 aa12.36□□□□□ -0.43
TNRC6A-206ENST00000477487 VNN2O95498 520 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 IL4RP24394 825 aa12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 RPL21P46778 160 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-206ENST00000477487 TAP1Q03518 808 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms