RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SETD7Q8WTS6 366 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SCFD1Q8WVM8 642 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 BHMTQ93088 406 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TMX3Q96JJ7 454 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 FGFBP2Q9BYJ0 223 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PANK2Q9BZ23 570 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF518BQ9C0D4 1074 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ELOVL4Q9GZR5 314 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 MIR1-1HGQ9H1L0 117 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC6A17Q9H1V8 727 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 DPEP3Q9H4B8 488 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 CCSER2Q9H7U1 834 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 INTS13Q9NVM9 706 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PPP4R2Q9NY27 417 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 NXF1Q9UBU9 619 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 CHORDC1Q9UHD1 332 aaPredicted RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 RAD54BQ9Y620 910 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SPEGQ15772 3267 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ANKRD11Q6UB99 2663 aaPredicted RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 DSPP15924 2871 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 IGHV1OR15-9A0A0B4J2B8 117 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 E2F8A0AVK6 867 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 GOLGA8CPA6NN73 597 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 TRIM24O15164 1050 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 COCHO43405 550 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF217O75362 1048 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 RTN3O95197 1032 aaPredicted RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 GNSP15586 552 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 PTPN1P18031 435 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 NDUFV2P19404 249 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 MAOBP27338 520 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 NTSR1P30989 418 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 HOXD12P35452 270 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CYP2J2P51589 502 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CACNA2D1P54289 1103 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 NOP14P78316 857 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SCAPQ12770 1279 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 RABEP1Q15276 862 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SURF1Q15526 300 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 WDR72Q3MJ13 1102 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CCDC157Q569K6 752 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SPDYCQ5MJ68 293 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 HECTD3Q5T447 861 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 EGFLAMQ63HQ2 1017 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SCARA5Q6ZMJ2 495 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 TRAPPC11Q7Z392 1133 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 PIP4P1Q86T03 277 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 PROSER1Q86XN7 944 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CACUL1Q86Y37 369 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CBWD2Q8IUF1 395 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 WDR49Q8IV35 697 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC41A1Q8IVJ1 513 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CCDC65Q8IXS2 484 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 NUP93Q8N1F7 819 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 PDILTQ8N807 584 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 TERB1Q8NA31 727 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CXorf38Q8TB03 319 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 MDM1Q8TC05 714 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 HNRNPLLQ8WVV9 542 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 HPS3Q969F9 1004 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 JAKMIP2Q96AA8 810 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CCDC127Q96BQ5 260 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 C8orf48Q96LL4 319 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CLIC6Q96NY7 704 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 XPO6Q96QU8 1125 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 KIF2CQ99661 725 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 TTLL2Q9BWV7 592 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CCDC86Q9H6F5 360 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CD93Q9NPY3 652 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 SPHK2Q9NRA0 654 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 OLFML3Q9NRN5 406 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 HSPBP1Q9NZL4 362 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 LSM7Q9UK45 103 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 CLIC4Q9Y696 253 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 NBEAQ8NFP9 2946 aa7.09□□□□□ -1.27
RTFDC1-206ENST00000477485 ITPR1Q14643 2758 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A1W2PQD8 194 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 TAF4O00268 1085 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CLIC2O15247 247 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 OLFM2O95897 454 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CD59P13987 128 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 SLC5A3P53794 718 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 GOLGA8FQ08AF8 430 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 GOLGA8DPQ0D2H9 430 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 GRIK2Q13002 908 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 BIRC3Q13489 604 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 HNRNPDQ14103 355 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 WDR45BQ5MNZ6 344 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 PEAR1Q5VY43 1037 aaPredicted RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 CCDC73Q6ZRK6 1079 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 PDZD3Q86UT5 571 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM35AQ86V20 835 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 TMEM25Q86YD3 366 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 MIB1Q86YT6 1006 aa7.08□□□□□ -1.28
RTFDC1-206ENST00000477485 ZCCHC9Q8N567 271 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms