RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ZNF143P52747 638 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-221ENST00000477203 PDIA2Q13087 525 aaKnown RBP13.98□□□□□ -0.17
HDAC7-221ENST00000477203 KYAT1Q16773 422 aa13.98□□□□□ -0.17
HDAC7-221ENST00000477203 BBS9Q3SYG4 887 aa13.98□□□□□ -0.17
HDAC7-221ENST00000477203 C3orf58Q8NDZ4 430 aa13.98□□□□□ -0.17
HDAC7-221ENST00000477203 CNPY3Q9BT09 278 aa13.98□□□□□ -0.17
HDAC7-221ENST00000477203 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
HDAC7-221ENST00000477203 SHOX2O60902 331 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 AVILO75366 819 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 KLRC2P26717 231 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 MAGEA4P43358 317 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 TMED2Q15363 201 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 DCAF6Q58WW2 860 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 OLFML1Q6UWY5 402 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SRRM1Q8IYB3 904 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 ALLCQ8N6M5 410 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 VRTNQ9H8Y1 702 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 WDR35Q9P2L0 1181 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 TRPA1O75762 1119 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 GNAT1P11488 350 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SLC6A3Q01959 620 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 AUHQ13825 339 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SNCBQ16143 134 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 PPP1R2P3Q6NXS1 205 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 RHBDF2Q6PJF5 856 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 ALKAL1Q6UXT8 129 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SLC35F5Q8WV83 523 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SNRNP25Q9BV90 132 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 KATNAL1Q9BW62 490 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 FAM105AQ9NUU6 356 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 HAUS2Q9NVX0 235 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 FAM155AB1AL88 458 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 PIRO00625 290 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 UPP2O95045 317 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 TTC4O95801 387 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SOCS4Q8WXH5 440 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 RUNDC3BQ96NL0 473 aa13.97□□□□□ -0.17
HDAC7-221ENST00000477203 MTG1Q9BT17 334 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
HDAC7-221ENST00000477203 SSTR1P30872 391 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 BRCC3P46736 316 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 FCGRTP55899 365 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 HTRA3P83110 453 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.177e-7■■■■□ 23.4
HDAC7-221ENST00000477203 OASLQ15646 514 aaKnown RBP13.96□□□□□ -0.17
HDAC7-221ENST00000477203 PTGISQ16647 500 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 QPCTQ16769 361 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 KIAA0319Q5VV43 1072 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 HFE2Q6ZVN8 426 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 CCDC185Q8N715 623 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 ZNF483Q8TF39 744 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-221ENST00000477203 P3H4Q92791 437 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC7-221ENST00000477203 HOMER3Q9NSC5 361 aa13.96□□□□□ -0.17
HDAC7-221ENST00000477203 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
HDAC7-221ENST00000477203 MYBPHLA2RUH7 354 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 MCF2LO15068 1137 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 MGEA5O60502 916 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 SPAG7O75391 227 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 RPL22P35268 128 aaKnown RBP13.96□□□□□ -0.18
HDAC7-221ENST00000477203 SKOR1P84550 965 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 DYDC1Q8WWB3 177 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.18
HDAC7-221ENST00000477203 SENP8Q96LD8 212 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.18
HDAC7-221ENST00000477203 TPX2Q9ULW0 747 aaKnown RBP13.96□□□□□ -0.18
HDAC7-221ENST00000477203 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 KCNN4O15554 427 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 B3GAT3O94766 335 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 CD4P01730 458 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 HDAC4P56524 1084 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 BCAR1P56945 870 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-221ENST00000477203 DPYSL3Q14195 570 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 ACCSLQ4AC99 568 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 LRRC38Q5VT99 294 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 EDEM1Q92611 657 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 TBCBQ99426 244 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 PRMT1Q99873 361 aaKnown RBP13.95□□□□□ -0.18
HDAC7-221ENST00000477203 TRIM56Q9BRZ2 755 aaKnown RBP13.95□□□□□ -0.18
HDAC7-221ENST00000477203 SPATS2LQ9NUQ6 558 aaKnown RBP13.95□□□□□ -0.18
HDAC7-221ENST00000477203 PADI3Q9ULW8 664 aa13.95□□□□□ -0.18
HDAC7-221ENST00000477203 DNALI1O14645 258 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms