RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 ARHGAP6O43182 974 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 AKR1B10O60218 316 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 NBL1P41271 181 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 RAB41Q5JT25 222 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 CWF19L1Q69YN2 538 aaKnown RBP18.58■□□□□ 0.56
SREBF1-211ENST00000476994 ACAD10Q6JQN1 1059 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 ALKBH5Q6P6C2 394 aaKnown RBP18.58■□□□□ 0.56
SREBF1-211ENST00000476994 MON1BQ7L1V2 547 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 GPRIN1Q7Z2K8 1008 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 VPS36Q86VN1 386 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 CCDC105Q8IYK2 499 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 RSAD2Q8WXG1 361 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 CPA5Q8WXQ8 436 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 KCTD13Q8WZ19 329 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 CPXM1Q96SM3 734 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 EIF3CQ99613 913 aaKnown RBP18.58■□□□□ 0.56
SREBF1-211ENST00000476994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.58■□□□□ 0.56
SREBF1-211ENST00000476994 CYLDQ9NQC7 956 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 SEPT11Q9NVA2 429 aaKnown RBP18.58■□□□□ 0.56
SREBF1-211ENST00000476994 YIPF1Q9Y548 306 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 MIA3Q5JRA6 1907 aa18.58■□□□□ 0.56
SREBF1-211ENST00000476994 NARSO43776 548 aaKnown RBP18.57■□□□□ 0.56
SREBF1-211ENST00000476994 C8AP07357 584 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 MMP8P22894 467 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 HOXA9P31269 272 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 CYLC1P35663 651 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-211ENST00000476994 GABRB2P47870 512 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 DDR2Q16832 855 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 SDHAF4Q5VUM1 108 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 NKD2Q969F2 451 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-211ENST00000476994 SPATA17Q96L03 361 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 HSFY1Q96LI6 401 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 DEF6Q9H4E7 631 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 CYP4F11Q9HBI6 524 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 IL37Q9NZH6 218 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 CA14Q9ULX7 337 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 CEP83Q9Y592 693 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 INSL5Q9Y5Q6 135 aa18.57■□□□□ 0.56
SREBF1-211ENST00000476994 PTPRZ1P23471 2315 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-211ENST00000476994 FAM170AA1A519 330 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 TRIM66O15016 1216 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 RTN2O75298 545 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 ERBB2P04626 1255 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 GRIK1P39086 918 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 TUFMP49411 452 aaKnown RBP18.56■□□□□ 0.56
SREBF1-211ENST00000476994 RGS7P49802 495 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 MGAT5BQ3V5L5 792 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 TOGARAM2Q6ZUX3 1019 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 MTSS1LQ765P7 747 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 RTL10Q7L3V2 364 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 GRASPQ7Z6J2 395 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-211ENST00000476994 DTWD2Q8NBA8 298 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 ACRBPQ8NEB7 543 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 CEP295NLQ96MC4 621 aa18.56■□□□□ 0.56
SREBF1-211ENST00000476994 SEPT5Q99719 369 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-211ENST00000476994 TCRBV5S1A1TA0A578 114 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 TMCO5BA8MYB1 307 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 CCL16O15467 120 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 FTLP02792 175 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-211ENST00000476994 GSCP56915 257 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-211ENST00000476994 ANGPT1Q15389 498 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 CCDC122Q5T0U0 273 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 MMS22LQ6ZRQ5 1243 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 BHLHA9Q7RTU4 235 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 SCN4BQ8IWT1 228 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 MCOLN2Q8IZK6 566 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 STKLD1Q8NE28 680 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 SLC7A14Q8TBB6 771 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 SHDQ96IW2 340 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 PPP1R13BQ96KQ4 1090 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 C11orf70Q9BRQ4 267 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 PACSIN1Q9BY11 444 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 CDH7Q9ULB5 785 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 USP3Q9Y6I4 520 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 FAM186AA6NE01 2351 aa18.55■□□□□ 0.56
SREBF1-211ENST00000476994 RIF1Q5UIP0 2472 aaKnown RBP18.55■□□□□ 0.56
SREBF1-211ENST00000476994 FAM92AA1XBS5 289 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 E5RJQ4 531 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 PAPSS1O43252 624 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-211ENST00000476994 PI15O43692 258 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 NSFP46459 744 aaKnown RBP18.54■□□□□ 0.56
SREBF1-211ENST00000476994 SLC5A3P53794 718 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 USP46P62068 366 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 RPL10AP62906 217 aaKnown RBP18.54■□□□□ 0.56
SREBF1-211ENST00000476994 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
SREBF1-211ENST00000476994 HTR4Q13639 388 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 C2CD6Q53TS8 623 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 ERICH1Q86X53 443 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 SCML4Q8N228 414 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 GPR152Q8TDT2 470 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 VCPIP1Q96JH7 1222 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 DESI2Q9BSY9 194 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 TTLL2Q9BWV7 592 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 TBC1D17Q9HA65 648 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 ARHGEF3Q9NR81 526 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 ADGRG1Q9Y653 693 aa18.54■□□□□ 0.56
SREBF1-211ENST00000476994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.54■□□□□ 0.56
SREBF1-211ENST00000476994 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms