RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 SMTNL2Q2TAL5 461 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 DDX23Q9BUQ8 820 aaKnown RBP20.74■□□□□ 0.91
CLK2-205ENST00000476983 POPDC2Q9HBU9 364 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.74■□□□□ 0.91
CLK2-205ENST00000476983 NAALADL1Q9UQQ1 740 aa20.74■□□□□ 0.91
CLK2-205ENST00000476983 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.74■□□□□ 0.91
CLK2-205ENST00000476983 V9GYY5 206 aaPredicted RBP20.74■□□□□ 0.91
CLK2-205ENST00000476983 CES2O00748 559 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CAPN9O14815 690 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SART1O43290 800 aaKnown RBP20.73■□□□□ 0.91
CLK2-205ENST00000476983 MATKP42679 507 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 ATXN1P54253 815 aaKnown RBP20.73■□□□□ 0.91
CLK2-205ENST00000476983 USP46P62068 366 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 PITX1P78337 314 aaPredicted RBP20.73■□□□□ 0.91
CLK2-205ENST00000476983 SEL1L2Q5TEA6 688 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SYPL2Q5VXT5 272 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 PM20D1Q6GTS8 502 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 NUP93Q8N1F7 819 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 MYRIPQ8NFW9 859 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 GIPC2Q8TF65 315 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 EDEM1Q92611 657 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 TBCBQ99426 244 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CTAGE15A4D2H0 777 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SEC24AO95486 1093 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 KRT1P04264 644 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 FYNP06241 537 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 GLI1P08151 1106 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CTAGE8P0CG41 777 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CTSAP10619 480 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 PTPN9P43378 593 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 C2orf54Q08AI8 447 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 MTMR3Q13615 1198 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 KCNT1Q5JUK3 1230 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SCYL2Q6P3W7 929 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 ARCQ7LC44 396 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 TMC7Q7Z402 723 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CTAGE6Q86UF2 777 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 CTAGE4Q8IX94 777 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 RASGEF1CQ8N431 466 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 SLC2A13Q96QE2 648 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 PEBP4Q96S96 227 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
CLK2-205ENST00000476983 AFF4Q9UHB7 1163 aaKnown RBP20.73■□□□□ 0.91
CLK2-205ENST00000476983 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.72■□□□□ 0.91
CLK2-205ENST00000476983 PI4K2BG5E9Z4 385 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 TEX28O15482 410 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 CA3P07451 260 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 NCAM1P13591 858 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 ATF6P18850 670 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 ACAP1Q15027 740 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 HADHQ16836 314 aaKnown RBP20.72■□□□□ 0.91
CLK2-205ENST00000476983 CCDC50Q8IVM0 306 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 ZNF461Q8TAF7 563 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 IRGQQ8WZA9 623 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 GOLGA1Q92805 767 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 CYP4F11Q9HBI6 524 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 CALCOCO1Q9P1Z2 691 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 USP18Q9UMW8 372 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 PLXNA3P51805 1871 aa20.72■□□□□ 0.91
CLK2-205ENST00000476983 GREB1Q4ZG55 1949 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 PGRMC1O00264 195 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 ABLIM3O94929 683 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 TRUB2O95900 331 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 FGGP02679 453 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 DESP17661 470 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 NOS2P35228 1153 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 PGFP49763 221 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 HDAC4P56524 1084 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 ERVFC1P60507 584 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 OTUD1Q5VV17 481 aaPredicted RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 DENND5BQ6ZUT9 1274 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 ADAT2Q7Z6V5 191 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 KATNAL2Q8IYT4 538 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 SCML4Q8N228 414 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 ADAM32Q8TC27 787 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 ACTRT1Q8TDG2 376 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 UBE2Q2Q8WVN8 375 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 RNF25Q96BH1 459 aaPredicted RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 TCF25Q9BQ70 676 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 C11orf84Q9BUA3 381 aaPredicted RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 UBE2OQ9C0C9 1292 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 ZNF638Q14966 1978 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 LILRB3O75022 631 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 TADA3O75528 432 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 CXCL14O95715 111 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 PCK1P35558 622 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 YWHAGP61981 247 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLK2-205ENST00000476983 RPL10AP62906 217 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 RAB33AQ14088 237 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 SMC1AQ14683 1233 aaKnown RBP20.71■□□□□ 0.91
CLK2-205ENST00000476983 PLPP4Q5VZY2 271 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 BSPRYQ5W0U4 402 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 POF1BQ8WVV4 589 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 HSPH1Q92598 858 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLK2-205ENST00000476983 STK39Q9UEW8 545 aa20.71■□□□□ 0.91
CLK2-205ENST00000476983 STAP1Q9ULZ2 295 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms