RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ACO1P21399 889 aaKnown RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 EIF2DP41214 584 aaKnown RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 SLC6A11P48066 632 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 KIF11P52732 1056 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 ARHGAP8P85298 464 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 LRRC63Q05C16 580 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 PUM1Q14671 1186 aaKnown RBP eCLIP11.4□□□□□ -0.58
SEC13-214ENST00000476597 CBWD6Q4V339 395 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 ZNF394Q53GI3 561 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 CBWD3Q5JTY5 395 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 CBWD5Q5RIA9 395 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 PPP1R26Q5T8A7 1209 aaPredicted RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 HTR3DQ70Z44 454 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 CEP68Q76N32 757 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 ZNF276Q8N554 614 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 SLC4A11Q8NBS3 891 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 GAB3Q8WWW8 586 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 WBP2Q969T9 261 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 HEXIM2Q96MH2 286 aaKnown RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 PNKPQ96T60 521 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 KLF16Q9BXK1 252 aaPredicted RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 DUSP16Q9BY84 665 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 UBXN6Q9BZV1 441 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 DNAI2Q9GZS0 605 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 CYLDQ9NQC7 956 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 TLR8Q9NR97 1041 aaKnown RBP11.4□□□□□ -0.58
SEC13-214ENST00000476597 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 EBF1Q9UH73 591 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 USP3Q9Y6I4 520 aa11.4□□□□□ -0.58
SEC13-214ENST00000476597 NCOR2Q9Y618 2525 aa11.4□□□□□ -0.59
SEC13-214ENST00000476597 DENND4CQ5VZ89 1909 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 TRIM49BA6NDI0 452 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 ANTXRLA6NF34 631 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 AXIN1O15169 862 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 GREM1O60565 184 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 ADH1CP00326 375 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 ATP5C1P36542 298 aaKnown RBP11.39□□□□□ -0.59
SEC13-214ENST00000476597 RAD23BP54727 409 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 GAD2Q05329 585 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 MESP2Q0VG99 397 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 DMC1Q14565 340 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 RSPO4Q2I0M5 234 aaPredicted RBP11.39□□□□□ -0.59
SEC13-214ENST00000476597 LY6G5CQ5SRR4 150 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 ACDQ96AP0 544 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 TMEM176AQ96HP8 235 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 DHTKD1Q96HY7 919 aaPredicted RBP11.39□□□□□ -0.59
SEC13-214ENST00000476597 HHIPQ96QV1 700 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 NACA2Q9H009 215 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 NMUR1Q9HB89 426 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
SEC13-214ENST00000476597 OSER1Q9NX31 292 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 ARMCX3Q9UH62 379 aaPredicted RBP11.39□□□□□ -0.59
SEC13-214ENST00000476597 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
SEC13-214ENST00000476597 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
SEC13-214ENST00000476597 A0A1W2PQH9 124 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 CYP26A1O43174 497 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 RPP40O75818 363 aaKnown RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 KAT7O95251 611 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 APBB3O95704 486 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 ADH5P11766 374 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 RARGP13631 454 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 SDHBP21912 280 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 BMP6P22004 513 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 GRIA2P42262 883 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 TNFRSF4P43489 277 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 PSEN1P49768 467 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 SEC13P55735 322 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 MRPS21P82921 87 aaKnown RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 LMNB2Q03252 620 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 STIM1Q13586 685 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 CSRP2Q16527 193 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 C2orf27AQ580R0 203 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 ARHGAP17Q68EM7 881 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 ISM2Q6H9L7 571 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 CCDC186Q7Z3E2 898 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 C12orf40Q86WS4 652 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 TMEM25Q86YD3 366 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 BBS7Q8IWZ6 715 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 FAM160A2Q8N612 972 aaPredicted RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 JAKMIP2Q96AA8 810 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 LOXL4Q96JB6 756 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 ZC3H10Q96K80 434 aaKnown RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 ARID3AQ99856 593 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 METTL14Q9HCE5 456 aaKnown RBP11.38□□□□□ -0.59
SEC13-214ENST00000476597 SPHK2Q9NRA0 654 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 SEMA4GQ9NTN9 838 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
SEC13-214ENST00000476597 OBSL1O75147 1896 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms