RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 BAG2O95816 211 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 BMP2P12643 396 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TIMP2P16035 220 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 LRPAP1P30533 357 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GJA5P36382 358 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ARL1P40616 181 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PRKCIP41743 596 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PHKA1P46020 1223 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 IFNAR2P48551 515 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RGS7P49802 495 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SCNN1DP51172 638 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ADCY7P51828 1080 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RAP1GDS1P52306 607 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 AP2S1P53680 142 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 NR1H2P55055 460 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DLG4P78352 724 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PHC1P78364 1004 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PPARDQ03181 441 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GFPT1Q06210 699 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 RAD51Q06609 339 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CDC20Q12834 499 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 FAPQ12884 760 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 STK3Q13188 491 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PDK3Q15120 406 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CLUL1Q15846 466 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ANKRD20A4Q4UJ75 823 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ACSBG2Q5FVE4 666 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ZC3H12BQ5HYM0 836 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 SNAP47Q5SQN1 464 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 C12orf60Q5U649 245 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 AGAP7PQ5VUJ5 663 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 FAM180BQ6P0A1 224 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CEP85Q6P2H3 762 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PGM2L1Q6PCE3 622 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 APOA5Q6Q788 366 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 UGT2A3Q6UWM9 527 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RANBP10Q6VN20 620 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RNF19BQ6ZMZ0 732 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 C1orf122Q6ZSJ8 110 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MFSD6Q6ZSS7 791 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 STK32CQ86UX6 486 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CCDC25Q86WR0 208 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CDR2LQ86X02 465 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 TCEAL8Q8IYN2 117 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 IFNL2Q8IZJ0 200 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 AFAP1L2Q8N4X5 818 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 KCT2Q8NC54 265 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RASGRP4Q8TDF6 673 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PGM2Q96G03 612 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 C7orf26Q96N11 449 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ZNF641Q96N77 438 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 STRBPQ96SI9 672 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 GAL3ST1Q99999 423 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 NUDT12Q9BQG2 462 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 YIPF4Q9BSR8 244 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 HOXD1Q9GZZ0 328 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MKRN2Q9H000 416 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 KLC2Q9H0B6 622 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 STMN4Q9H169 189 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 MYLK2Q9H1R3 596 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TMEM60Q9H2L4 133 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DPEP3Q9H4B8 488 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 EBF3Q9H4W6 596 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 WDR26Q9H7D7 661 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CYP26B1Q9NR63 512 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MBIPQ9NS73 344 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GIMAP4Q9NUV9 329 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.3□□□□□ -1.72
CD55-208ENST00000476590 GPRC5BQ9NZH0 403 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SENP1Q9P0U3 644 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 IGSF9Q9P2J2 1179 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 HAO1Q9UJM8 370 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 LAMP5Q9UJQ1 280 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DNAJC12Q9UKB3 198 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CPSF3Q9UKF6 684 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 GRID1Q9ULK0 1009 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RNF112Q9ULX5 631 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PADI4Q9UM07 663 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 REXO2Q9Y3B8 237 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 MSRB2Q9Y3D2 182 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CEPT1Q9Y6K0 416 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 IFT172Q9UG01 1749 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 KDM5AP29375 1690 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ALG1L2C9J202 215 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TAF4O00268 1085 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 KRIT1O00522 736 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DDX3XO00571 662 aaKnown RBP eCLIP4.3□□□□□ -1.72
CD55-208ENST00000476590 ACOX3O15254 700 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RAD51BO15315 384 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PDPK1O15530 556 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ITM2AO43736 263 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MAFO75444 373 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 DNAJB5O75953 348 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 BMP10O95393 424 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms