RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NR1H4Q96RI1 486 aaPredicted RBP8.73□□□□□ -1.01
VAPB-205ENST00000476395 SHCBP1LQ9BZQ2 653 aa8.73□□□□□ -1.01
VAPB-205ENST00000476395 ZNF212Q9UDV6 495 aa8.73□□□□□ -1.01
VAPB-205ENST00000476395 SLC7A8Q9UHI5 535 aa8.73□□□□□ -1.01
VAPB-205ENST00000476395 ADAMTS6Q9UKP5 1117 aa8.73□□□□□ -1.01
VAPB-205ENST00000476395 AK5Q9Y6K8 562 aa8.73□□□□□ -1.01
VAPB-205ENST00000476395 WDR64B1ANS9 1081 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 EXTL3O43909 919 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 RAD17O75943 681 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 FOSL1P15407 271 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 GLRA2P23416 452 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 RASA2Q15283 850 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 KCTD21Q4G0X4 260 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 LRRC8BQ6P9F7 803 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 UBE2Q1Q7Z7E8 422 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CPNE9Q8IYJ1 553 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ST13P4Q8IZP2 240 aaPredicted RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 ANKRD35Q8N283 1001 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 NAT8LQ8N9F0 302 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 TFAP2BQ92481 460 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CCDC124Q96CT7 223 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 SRPK1Q96SB4 655 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 TMEM121Q9BTD3 319 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CENPOQ9BU64 300 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 KLHL4Q9C0H6 718 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SAYSD1Q9NPB0 183 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 NDE1Q9NXR1 346 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 MARCOQ9UEW3 520 aaPredicted RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 PACSIN3Q9UKS6 424 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ZNF638Q14966 1978 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 PTPRFP10586 1907 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 BRCA1P38398 1863 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 TMEM63AO94886 807 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 PIGRP01833 764 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SMIM18P0DKX4 95 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 RARBP10826 455 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ZNF24P17028 368 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 GJC1P36383 396 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ETV4P43268 484 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 DMP1Q13316 513 aaPredicted RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 PEX6Q13608 980 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 RAB6CQ53S08 254 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ENOSF1Q7L5Y1 443 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CPXCR1Q8N123 301 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 MTMR14Q8NCE2 650 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 GRK7Q8WTQ7 553 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 GAB3Q8WWW8 586 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CPT1BQ92523 772 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 BHMTQ93088 406 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 NKD2Q969F2 451 aaPredicted RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 SIKE1Q9BRV8 207 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 RAB6CQ9H0N0 254 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 EHMT1Q9H9B1 1298 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 PFDN4Q9NQP4 134 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SPATA7Q9P0W8 599 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 E7ESA3 106 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 TLR3O15455 904 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 CD48P09326 243 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 DHRS4L1P0CG22 281 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 IL4RP24394 825 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 JAK3P52333 1124 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 ARL4CP56559 192 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 C1QBPQ07021 282 aaKnown RBP8.72□□□□□ -1.01
VAPB-205ENST00000476395 GSTA3Q16772 222 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 NADK2Q4G0N4 442 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 KLHL35Q6PF15 583 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 OR6Y1Q8NGX8 325 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 FEZF2Q8TBJ5 459 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 HAUS1Q96CS2 278 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 VCPIP1Q96JH7 1222 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
VAPB-205ENST00000476395 CENPFP49454 3210 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 ZSWIM8A7E2V4 1837 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 TRIM43BA6NCK2 446 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 FCHO1O14526 889 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 PDE5AO76074 875 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 TFAP2AP05549 437 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 KITP10721 976 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 MYL2P10916 166 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 TNFSF9P41273 254 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 PDE1BQ01064 536 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 TBL3Q12788 808 aaKnown RBP8.71□□□□□ -1.01
VAPB-205ENST00000476395 SFSWAPQ12872 951 aaKnown RBP8.71□□□□□ -1.01
VAPB-205ENST00000476395 ANKDD1AQ495B1 522 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 ZNF362Q5T0B9 420 aaPredicted RBP8.71□□□□□ -1.01
VAPB-205ENST00000476395 FAAH2Q6GMR7 532 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 TMEM270Q6UE05 265 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 CCDC89Q8N998 374 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.01
VAPB-205ENST00000476395 ZFP28Q8NHY6 868 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 ZNF606Q8WXB4 792 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 VMP1Q96GC9 406 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 GCNAQ96QF7 691 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 RMDN3Q96TC7 470 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms