RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 UGT1A10Q9HAW8 530 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A8Q9HAW9 530 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 PNPLA3Q9NST1 481 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 MARCOQ9UEW3 520 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 APOBEC2Q9Y235 224 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 RNF11Q9Y3C5 154 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ZNFX1Q9P2E3 1918 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UBE4BO95155 1302 aa14.33□□□□□ -0.11
HDAC1-206ENST00000476391 A0A1B0GTW7 788 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 KDM1AO60341 852 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 CAPN15O75808 1086 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 USP17L8P0C7I0 530 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 CLK2P49760 499 aaKnown RBP14.33□□□□□ -0.12
HDAC1-206ENST00000476391 CHRNDQ07001 517 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 STX3Q13277 289 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 CHI3L2Q15782 390 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 PPP1R18Q6NYC8 613 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 RHOT1Q8IXI2 618 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 GALNT4Q8N4A0 578 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 TERB1Q8NA31 727 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-206ENST00000476391 KLHL3Q9UH77 587 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 DNPEPQ9ULA0 475 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-206ENST00000476391 E7ESA3 106 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
HDAC1-206ENST00000476391 L1CAMP32004 1257 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 KCNJ8Q15842 424 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 FRA10AC1Q70Z53 315 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 PALM2Q8IXS6 379 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 RMND5BQ96G75 393 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-206ENST00000476391 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 ARHGAP26Q9UNA1 814 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 SLC8A2Q9UPR5 921 aa14.33□□□□□ -0.12
HDAC1-206ENST00000476391 EMSYQ7Z589 1322 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 KPNA4O00629 521 aaPredicted RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 GNPATO15228 680 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 INHBAP08476 426 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 RPA1P27694 616 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 PSMC6P62333 389 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SLC47A2Q86VL8 602 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 CARM1Q86X55 608 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SLFN12Q8IYM2 578 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 THEMISQ8N1K5 641 aaPredicted RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ADAMTS16Q8TE57 1224 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SLC44A1Q8WWI5 657 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 COA7Q96BR5 231 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SERPINI1Q99574 410 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 DOK1Q99704 481 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 MECRQ9BV79 373 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 OSBPL11Q9BXB4 747 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 FAM96AQ9H5X1 160 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 THAP1Q9NVV9 213 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 PRPF19Q9UMS4 504 aaKnown RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 AP4S1Q9Y587 144 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 NUP98P52948 1817 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 TRIM64CA6NLI5 447 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 BANF1O75531 89 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 BMP3P12645 472 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 TTKP33981 857 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 GYG1P46976 350 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 CYP2A13Q16696 494 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ARCQ7LC44 396 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 KBTBD7Q8WVZ9 684 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 DLG3Q92796 817 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 RPGRQ92834 1020 aaKnown RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 PSD2Q9BQI7 771 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 EHD1Q9H4M9 534 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 CAAP1Q9H8G2 361 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 C10orf88Q9H8K7 445 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 CLK4Q9HAZ1 481 aaKnown RBP14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ERVK-11Q9UQG0 969 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SNCAIPQ9Y6H5 919 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 SLC30A1Q9Y6M5 507 aa14.32□□□□□ -0.12
HDAC1-206ENST00000476391 ARHGEF37A1IGU5 675 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 KRBA1A5PL33 1030 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CFAP99D6REC4 459 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PROSCO94903 275 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 SLITRK3O94933 977 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 ETS1P14921 441 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CYP11B1P15538 503 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 JAK1P23458 1154 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 BMXP51813 675 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 NR1D2Q14995 579 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 EPC2Q52LR7 807 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CES4AQ5XG92 561 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CDHR3Q6ZTQ4 885 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CYP2U1Q7Z449 544 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 FBXO36Q8NEA4 188 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms