RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 AURKCQ9UQB9 309 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SSC5DA1L4H1 1573 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 FSBPO95073 299 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 HMGCRP04035 888 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SLC12A2P55011 1212 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 KRT76Q01546 638 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SPIRE1Q08AE8 756 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 USP4Q13107 963 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CLEC16AQ2KHT3 1053 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 FASTKD1Q53R41 847 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PPM1JQ5JR12 505 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 FNBP1LQ5T0N5 605 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 FAM219BQ5XKK7 198 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SCN4BQ8IWT1 228 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SKA2Q8WVK7 121 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CCT6BQ92526 530 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 HDAC11Q96DB2 347 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ZBED3Q96IU2 234 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SPATA17Q96L03 361 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 OMDQ99983 421 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 OLFML3Q9NRN5 406 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ARL8BQ9NVJ2 186 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 IP6K2Q9UHH9 426 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 C15orf41Q9Y2V0 281 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PTPRJQ12913 1337 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 FRYLO94915 3013 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ATP6AP2A0A1C7CYW4 349 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SPDYE5A6NIY4 337 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 E5RJQ4 531 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PFDN1O60925 122 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ATP6AP2O75787 350 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ARIH2O95376 493 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ERVK-10P10266 1014 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 HSPA6P17066 643 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 AMPD1P23109 780 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 WDR4P57081 412 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NSUN2Q08J23 767 aaKnown RBP eCLIP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ITGA9Q13797 1035 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 HSDL1Q3SXM5 330 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SNX30Q5VWJ9 437 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 LPCAT4Q643R3 524 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 HEATR6Q6AI08 1181 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CXCL17Q6UXB2 119 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CYP2R1Q6VVX0 501 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 OTOAQ7RTW8 1153 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ANKS1BQ7Z6G8 1248 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CCNJLQ8IV13 435 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NAT16Q8N8M0 369 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 DCBLD1Q8N8Z6 715 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM161BQ8NDZ6 487 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 TEKT4Q8WW24 435 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 MAIP1Q8WWC4 291 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF75CPQ92670 426 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 LGMNQ99538 433 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 TEX13BQ9BXU2 312 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 LRRC4Q9HBW1 653 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 APOBEC3GQ9HC16 384 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 RNF186Q9NXI6 227 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ZFATQ9P243 1243 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PSMC3IPQ9P2W1 217 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SLC39A10Q9ULF5 831 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NCOR1O75376 2440 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 MYO10Q9HD67 2058 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 IGLV3-22A0A075B6J6 115 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 IQANK1A0A1B0GTG1 560 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NCF1BA6NI72 391 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NCF1CA8MVU1 366 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SPECC1L-ADORA2AF8WAN1 911 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PHGDHO43175 533 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 DCXO43602 365 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SHOX2O60902 331 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 KRT37O76014 449 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PROSCO94903 275 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NFICP08651 508 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 CCDC130P13994 396 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NCF1P14598 390 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 GLRA2P23416 452 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 MIPP30301 263 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ADSLP30566 484 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PTDSS1P48651 473 aaKnown RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SP2Q02086 613 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 RASA2Q15283 850 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 OR6P1Q8NGX9 317 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 TFAP2BQ92481 460 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ATP2A3Q93084 1043 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF669Q96BR6 464 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PIDD1Q9HB75 910 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 UVRAGQ9P2Y5 699 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF214Q9UL59 606 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-204ENST00000476379 NOD1Q9Y239 953 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 DNAJC16Q9Y2G8 782 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 PCDHA3Q9Y5H8 950 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 SCINQ9Y6U3 715 aa5.18□□□□□ -1.58
CCDC39-204ENST00000476379 WDR27A2RRH5 827 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FCHO1O14526 889 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PMPCBO75439 489 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GPC4O75487 556 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DGAT1O75907 488 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DCTN3O75935 186 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms