RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 EGR1P18146 543 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 GPS1Q13098 491 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF169Q14929 603 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-211ENST00000476215 PGBD2Q6P3X8 592 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF551Q7Z340 670 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ADGRG3Q86Y34 549 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 C11orf44Q8N8P7 122 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF527Q8NB42 609 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF384Q8TF68 577 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 PDLIM2Q96JY6 352 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 RIOX1Q9H6W3 641 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 VPS51Q9UID3 782 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 ST3GAL5Q9UNP4 418 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 KIAA0355O15063 1070 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 FFAR2O15552 330 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 PECAM1P16284 738 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-211ENST00000476215 NDUFB7P17568 137 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 MST1P26927 711 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 RBL1P28749 1068 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 CXCR5P32302 372 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 CYP2C18P33260 490 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 TPTEP56180 551 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 TIRAPP58753 221 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-211ENST00000476215 TRIM14Q14142 442 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 RAB30Q15771 203 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 MAPKAPK3Q16644 382 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 SLC5A9Q2M3M2 681 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 DPY19L2P1Q6NXN4 242 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 CLEC9AQ6UXN8 241 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 DPY19L3Q6ZPD9 716 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 KRT73Q86Y46 540 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 IPO4Q8TEX9 1081 aaKnown RBP5.83□□□□□ -1.48
PTCD3-211ENST00000476215 ZDHHC12Q96GR4 267 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 PSMD1Q99460 953 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 NECTIN3Q9NQS3 549 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 SERTAD4Q9NUC0 356 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 INSL6Q9Y581 213 aa5.83□□□□□ -1.48
PTCD3-211ENST00000476215 EXOC5O00471 708 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 ELFN1P0C7U0 828 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 ARP10275 920 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 JUPP14923 745 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 ENGP17813 658 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 PCSK6P29122 969 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 TRAPPC10P48553 1259 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 ERCC6LQ2NKX8 1250 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 ARHGAP15Q53QZ3 475 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 TMTC4Q5T4D3 741 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 STRIP1Q5VSL9 837 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 PARS2Q7L3T8 475 aaKnown RBP5.82□□□□□ -1.48
PTCD3-211ENST00000476215 RAB11FIP4Q86YS3 637 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 FSTL5Q8N475 847 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-211ENST00000476215 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-211ENST00000476215 GRAMD1AQ96CP6 724 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 RSPRY1Q96DX4 576 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 HAPLN3Q96S86 360 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 R3HDMLQ9H3Y0 253 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 RIMKLBQ9ULI2 386 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 SLC27A6Q9Y2P4 619 aa5.82□□□□□ -1.48
PTCD3-211ENST00000476215 GOLGA6L3A6NEY3 463 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 AP4M1O00189 453 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 QSOX1O00391 747 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 MGST3O14880 152 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
PTCD3-211ENST00000476215 PRKCBP05771 671 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 DLDP09622 509 aaKnown RBP5.81□□□□□ -1.48
PTCD3-211ENST00000476215 SLC5A2P31639 672 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 RARRES1P49788 294 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 CCT8P50990 548 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 ICA1Q05084 483 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 PUM3Q15397 648 aaKnown RBP5.81□□□□□ -1.48
PTCD3-211ENST00000476215 ELF2Q15723 593 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 FAM83BQ5T0W9 1011 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 ARL6IP4Q66PJ3 421 aaKnown RBP5.81□□□□□ -1.48
PTCD3-211ENST00000476215 ABLIM2Q6H8Q1 611 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 Q6ZWC4 215 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 METTL25Q8N6Q8 603 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 ABHD5Q8WTS1 349 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 VOPP1Q96AW1 172 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 PRR25Q96S07 402 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 PTPRHQ9HD43 1115 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 DUSP22Q9NRW4 184 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 DLL3Q9NYJ7 618 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 IGSF9Q9P2J2 1179 aa5.81□□□□□ -1.48
PTCD3-211ENST00000476215 NKX1-2Q9UD57 310 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-211ENST00000476215 PIP5K1BO14986 540 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 ZSCAN9O15535 394 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 PMPCBO75439 489 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 SKAP2O75563 359 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 VIPP01282 170 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 FAM163BP0C2L3 166 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 SRGAP2BP0DMP2 458 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 CD19P15391 556 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 CTGFP29279 349 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 GKP32189 559 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 EEFSECP57772 596 aaKnown RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 SUMO2P61956 95 aaKnown RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 E2F1Q01094 437 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 NSUN2Q08J23 767 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 CYP1B1Q16678 543 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms