RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 GCKP35557 465 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 RASSF2P50749 326 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 DNAJC3Q13217 504 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 GRB14Q14449 540 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 SCYL2Q6P3W7 929 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 CATSPER4Q7RTX7 472 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 ZCCHC9Q8N567 271 aaKnown RBP12.99□□□□□ -0.33
RNF220-211ENST00000474956 TEX9Q8N6V9 391 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
RNF220-211ENST00000474956 CHKBQ9Y259 395 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 FGFR1P11362 822 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 GRIK3Q13003 919 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 TDRPQ86YL5 185 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 DENND1AQ8TEH3 1009 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 F5H423 210 aaPredicted RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 TMEM63AO94886 807 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 GNAZP19086 355 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SSTR1P30872 391 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 AFF1P51825 1210 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 MCRS1Q96EZ8 462 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 TTC25Q96NG3 672 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SMG5Q9UPR3 1016 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 LRRC42Q9Y546 428 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 MED7O43513 233 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 AVILO75366 819 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 RECQL4O94761 1208 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 TRUB2O95900 331 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 PDGFRAP16234 1089 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 TARSP26639 723 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 ADORA2BP29275 332 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 CDC25CP30307 473 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 TNFAIP2Q03169 654 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 PDK4Q16654 411 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 KCNV2Q8TDN2 545 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 STK32AQ8WU08 396 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 ASB7Q9H672 318 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 NGRNQ9NPE2 291 aaKnown RBP12.98□□□□□ -0.33
RNF220-211ENST00000474956 TMPRSS4Q9NRS4 437 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 HAO1Q9UJM8 370 aa12.98□□□□□ -0.33
RNF220-211ENST00000474956 CALRP27797 417 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 GTF2A2P52657 109 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 CDH6P55285 790 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 SATB1Q01826 763 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 DGKDQ16760 1214 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 CPT1BQ92523 772 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
RNF220-211ENST00000474956 TRIM56Q9BRZ2 755 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 TRABDQ9H4I3 376 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 MFHAS1Q9Y4C4 1052 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 EDF1O60869 148 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 PEX11AO75192 247 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 RBP5P82980 135 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 CCDC14Q49A88 953 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 LRRC38Q5VT99 294 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 EP400NLQ6ZTU2 488 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 IGDCC3Q8IVU1 814 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 C4orf33Q8N1A6 199 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 OR6B3Q8NGW1 331 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 STRIP2Q9ULQ0 834 aa12.97□□□□□ -0.33
RNF220-211ENST00000474956 MYO18AQ92614 2054 aaKnown RBP12.97□□□□□ -0.33
RNF220-211ENST00000474956 KIF3CO14782 793 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CYP2C9P11712 490 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 GPX6P59796 221 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 FAM13CQ8NE31 585 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 NT5C1AQ9BXI3 368 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 RPL26L1Q9UNX3 145 aaKnown RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms