RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SEMA4GQ9NTN9 838 aa16■□□□□ 0.15
VARS-223ENST00000474643 FAM49BQ9NUQ9 324 aa16■□□□□ 0.15
VARS-223ENST00000474643 TBC1D14Q9P2M4 693 aa16■□□□□ 0.15
VARS-223ENST00000474643 CHORDC1Q9UHD1 332 aaPredicted RBP16■□□□□ 0.15
VARS-223ENST00000474643 RWDD2AQ9UIY3 292 aa16■□□□□ 0.15
VARS-223ENST00000474643 NME7Q9Y5B8 376 aa16■□□□□ 0.15
VARS-223ENST00000474643 MYH10P35580 1976 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 CCDC163A0A0D9SF12 145 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 AXIN1O15169 862 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 LETM1O95202 739 aaPredicted RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 GNA14O95837 355 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 FAM200BP0CF97 657 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 IRF1P10914 325 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 ADORA2BP29275 332 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 GBP1P32455 592 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 DGKEP52429 567 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 MAP3K7CLP57077 242 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 DMC1Q14565 340 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 AASDHQ4L235 1098 aaPredicted RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 C2orf27AQ580R0 203 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 SYT13Q7L8C5 426 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 UNC93AQ86WB7 457 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 TAS1R2Q8TE23 839 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 RNF38Q9H0F5 515 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 FBXO44Q9H4M3 255 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 FBRSL1Q9HCM7 1045 aaKnown RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 DLL3Q9NYJ7 618 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.99■□□□□ 0.15
VARS-223ENST00000474643 DNAH14Q0VDD8 3507 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 DCHS1Q96JQ0 3298 aa15.99■□□□□ 0.15
VARS-223ENST00000474643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 ASS1P00966 412 aaKnown RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 OAS1P00973 400 aaKnown RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 APODP05090 189 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 CYP17A1P05093 508 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 ADH5P11766 374 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 CD58P19256 250 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 CETN1Q12798 172 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 PREPLQ4J6C6 727 aaPredicted RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 FOXR2Q6PJQ5 311 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 SASS6Q6UVJ0 657 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 PRR23CQ6ZRP0 262 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 NUDT18Q6ZVK8 323 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 FBXL13Q8NEE6 735 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 SCAMP5Q8TAC9 235 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 NETO1Q8TDF5 533 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 RTKNQ9BST9 563 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 SDCBP2Q9H190 292 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 PARD6AQ9NPB6 346 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 TLR8Q9NR97 1041 aaKnown RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 COMMD8Q9NX08 183 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 GMIPQ9P107 970 aa15.98■□□□□ 0.15
VARS-223ENST00000474643 HELZP42694 1942 aaKnown RBP15.98■□□□□ 0.15
VARS-223ENST00000474643 COCHO43405 550 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 ALDH1A2O94788 518 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 KDSRQ06136 332 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 DHCR24Q15392 516 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 CSRP2Q16527 193 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 DPCR1Q3MIW9 517 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 IL31Q6EBC2 164 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 KBTBD6Q86V97 674 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 PNKPQ96T60 521 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 ARRDC1-AS1Q9H2J1 176 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 RAB20Q9NX57 234 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 LSM7Q9UK45 103 aaKnown RBP15.97■□□□□ 0.15
VARS-223ENST00000474643 PTPRDP23468 1912 aa15.97■□□□□ 0.15
VARS-223ENST00000474643 ANAPC1Q9H1A4 1944 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 E2F8A0AVK6 867 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 TLR5O60602 858 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 ASPAP45381 313 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 TUBP50607 506 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 SLC8A3P57103 927 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 ANO4Q32M45 955 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 CBWD6Q4V339 395 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 CBWD3Q5JTY5 395 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 CBWD5Q5RIA9 395 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 C12orf29Q8N999 325 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 SLC35C1Q96A29 364 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 OTUB2Q96DC9 234 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 LOXL4Q96JB6 756 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 CCSER2Q9H7U1 834 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 CYP3A43Q9HB55 503 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 ARHGEF4Q9NR80 690 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 POLR3BQ9NW08 1133 aaPredicted RBP15.96■□□□□ 0.15
VARS-223ENST00000474643 BCCIPQ9P287 314 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS-223ENST00000474643 HMGXB4Q9UGU5 601 aa15.96■□□□□ 0.15
VARS-223ENST00000474643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS-223ENST00000474643 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.14
VARS-223ENST00000474643 CEP250Q9BV73 2442 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 DCDC2BA2VCK2 349 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms