RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IRF1P10914 325 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 HOXB6P17509 224 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 MSH3P20585 1137 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF131P52739 623 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 GRIN1Q05586 938 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 MAD2L1Q13257 205 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 NIPAL1Q6NVV3 410 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 DENND5BQ6ZUT9 1274 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CARNMT1Q8N4J0 409 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SLC26A7Q8TE54 656 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 NCLNQ969V3 563 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CYTH2Q99418 400 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 FMO2Q99518 471 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RHOXF2Q9BQY4 288 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 GOLPH3Q9H4A6 298 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ELAC1Q9H777 363 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 KRT82Q9NSB4 513 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CHCHD3Q9NX63 227 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 TRMT6Q9UJA5 497 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SLC27A6Q9Y2P4 619 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 HBS1LQ9Y450 684 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SNCAIPQ9Y6H5 919 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF541Q9H0D2 1346 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SMIM23A6NLE4 172 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 PRNPP04156 253 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF7P17097 686 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ITIH2P19823 946 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RAP1GDS1P52306 607 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 NRLP54845 237 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 GPM6BQ13491 265 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 PAGE2BQ5JRK9 111 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM164Q5U3C3 297 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ACAD10Q6JQN1 1059 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 GLYCTKQ8IVS8 523 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 NUP93Q8N1F7 819 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 DTX3LQ8TDB6 740 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 PLD4Q96BZ4 506 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 PRRG3Q9BZD7 231 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 TRIM31Q9BZY9 425 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CLPBQ9H078 707 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 GOLPH3LQ9H4A5 285 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC40Q9H9A6 602 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF711Q9Y462 761 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CCDC78A2IDD5 438 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NMT1P30419 496 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PRCPP42785 496 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PTGER2P43116 358 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PTENP60484 403 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 BCL2L1Q07817 233 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SPARCL1Q14515 664 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 KRT72Q14CN4 511 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HLA-DQA1Q5Y7H0 255 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ANKRD40Q6AI12 368 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 OR9Q1Q8NGQ5 310 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CFAP36Q96G28 342 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 INPP4AQ96PE3 977 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SENP2Q9HC62 589 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FBXO28Q9NVF7 368 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 AIPL1Q9NZN9 384 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MRTO4Q9UKD2 239 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TBC1D30Q9Y2I9 924 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PCDHA11Q9Y5I1 949 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HEBP2Q9Y5Z4 205 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SFI1A8K8P3 1242 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 GNGT2O14610 69 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 RRP9O43818 475 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PCDH8O95206 1070 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC4A1P02730 911 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 GUCY1A2P33402 732 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ACOT2P49753 483 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 RARRES1P49788 294 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CYP2A13Q16696 494 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FBXL19Q6PCT2 694 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 C12orf56Q8IXR9 622 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CMTR2Q8IYT2 770 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PHACTR4Q8IZ21 702 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 C12orf50Q8NA57 414 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZSCAN1Q8NBB4 408 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MCUQ8NE86 351 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HDAC7Q8WUI4 952 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TRAIPQ9BWF2 469 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 BCO2Q9BYV7 579 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 IGFLR1Q9H665 355 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ABCF3Q9NUQ8 709 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MPP6Q9NZW5 540 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 DEC1Q9P2X7 70 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SMG5Q9UPR3 1016 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MRPS33Q9Y291 106 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms