RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 GJA4P35212 333 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 FMO5P49326 533 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 TUBP50607 506 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 GOLGA8FQ08AF8 430 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 GOLGA8DPQ0D2H9 430 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 MAN2A1Q16706 1144 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 EML3Q32P44 896 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 SNX30Q5VWJ9 437 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 DHX40Q8IX18 779 aaKnown RBP19.66■□□□□ 0.74
CCDC171-206ENST00000474193 SEMA4DQ92854 862 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 CD101Q93033 1021 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 TMEM176AQ96HP8 235 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 PNPLA8Q9NP80 782 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 CISHQ9NSE2 258 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 RBM12Q9NTZ6 932 aaKnown RBP19.66■□□□□ 0.74
CCDC171-206ENST00000474193 SMPD4Q9NXE4 827 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 COQ4Q9Y3A0 265 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 SH3BP1Q9Y3L3 701 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 PTPRZ1P23471 2315 aaPredicted RBP19.65■□□□□ 0.74
CCDC171-206ENST00000474193 P4HA2O15460 535 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 ACO1P21399 889 aaKnown RBP19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TBXAS1P24557 533 aaPredicted RBP19.65■□□□□ 0.74
CCDC171-206ENST00000474193 GALK1P51570 392 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 CCINQ13939 588 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 NCAPHQ15003 741 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TMEM196Q5HYL7 178 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 CDKAL1Q5VV42 579 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TSSK4Q6SA08 328 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TADA2BQ86TJ2 420 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TATDN2Q93075 761 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 JAKMIP2Q96AA8 810 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 TWNKQ96RR1 684 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 DUSP16Q9BY84 665 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 LINC00597Q9H2U6 94 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 CFAP97Q9P2B7 532 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 RAB23Q9ULC3 237 aa19.65■□□□□ 0.74
CCDC171-206ENST00000474193 E2F8A0AVK6 867 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 FAM92AA1XBS5 289 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 BEST1O76090 585 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 OLFM2O95897 454 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 PSEN1P49768 467 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 IQCB1Q15051 598 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 CBWD6Q4V339 395 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 VWA3BQ502W6 1294 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 CBWD3Q5JTY5 395 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 CBWD5Q5RIA9 395 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 CLEC20AQ6ZU45 233 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 LUZP1Q86V48 1076 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 ZBTB44Q8NCP5 570 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 ZMIZ2Q8NF64 920 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 WHAMMQ8TF30 809 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 OTUB2Q96DC9 234 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 GMIPQ9P107 970 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 SCML2Q9UQR0 700 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 PATJQ8NI35 1801 aa19.64■□□□□ 0.73
CCDC171-206ENST00000474193 KIF26AQ9ULI4 1882 aaPredicted RBP19.64■□□□□ 0.73
CCDC171-206ENST00000474193 OTOL1A6NHN0 477 aaPredicted RBP19.63■□□□□ 0.73
CCDC171-206ENST00000474193 PMM2O15305 246 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 COCHO43405 550 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 TLR5O60602 858 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 ADH1CP00326 375 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 ATP5C1P36542 298 aaKnown RBP19.63■□□□□ 0.73
CCDC171-206ENST00000474193 SATB1Q01826 763 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 CUL2Q13617 745 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 PPP1R26Q5T8A7 1209 aaPredicted RBP19.63■□□□□ 0.73
CCDC171-206ENST00000474193 ADGRG2Q8IZP9 1017 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 RIN3Q8TB24 985 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 RUBCNQ92622 972 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 NT5C1BQ96P26 610 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 NDST4Q9H3R1 872 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 HESX1Q9UBX0 185 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 KIAA1257Q9ULG3 409 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 SLC8A2Q9UPR5 921 aa19.63■□□□□ 0.73
CCDC171-206ENST00000474193 PAPSS2O95340 614 aaPredicted RBP19.62■□□□□ 0.73
CCDC171-206ENST00000474193 ZDHHC11BP0C7U3 371 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 RALAP11233 206 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 CNR2P34972 360 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 LRMPQ12912 555 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 KRT31Q15323 416 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 PREPLQ4J6C6 727 aaPredicted RBP19.62■□□□□ 0.73
CCDC171-206ENST00000474193 SGO2Q562F6 1265 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 FKBP15Q5T1M5 1219 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 BTBD8Q5XKL5 378 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 FSTL4Q6MZW2 842 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 Q6ZS52 159 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 NELL1Q92832 810 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 CDK5RAP1Q96SZ6 601 aaKnown RBP19.62■□□□□ 0.73
CCDC171-206ENST00000474193 UBXN6Q9BZV1 441 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 VPS16Q9H269 839 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 CCSER2Q9H7U1 834 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 TAB2Q9NYJ8 693 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 NCDNQ9UBB6 729 aa19.62■□□□□ 0.73
CCDC171-206ENST00000474193 LSM7Q9UK45 103 aaKnown RBP19.62■□□□□ 0.73
CCDC171-206ENST00000474193 RIF1Q5UIP0 2472 aaKnown RBP19.61■□□□□ 0.73
CCDC171-206ENST00000474193 CD19P15391 556 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 ZNF18P17022 549 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 RAD23BP54727 409 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 GAS6Q14393 721 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 FILIP1LQ4L180 1135 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 GBP6Q6ZN66 633 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms