RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 ALG6Q9Y672 507 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 TEX28O15482 410 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 PSTPIP1O43586 416 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 GJB6O95452 261 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 EFEMP2O95967 443 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ATP1A1P05023 1023 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 NCAM1P13591 858 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 BMP8BP34820 402 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 NOS2P35228 1153 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 MATKP42679 507 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 RPL34P49207 117 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 CACNA2D1P54289 1103 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 RWDD2BP57060 319 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ERVK-21P61565 698 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 YWHAGP61981 247 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 RPL7AP62424 266 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ATP11AP98196 1134 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ARCQ7LC44 396 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SCML4Q8N228 414 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 LRRC57Q8N9N7 239 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ZMIZ2Q8NF64 920 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 JOSD2Q8TAC2 188 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SPPL3Q8TCT6 385 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 GIPC2Q8TF65 315 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 CLEC4CQ8WTT0 213 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 RNF34Q969K3 372 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 PBKQ96KB5 322 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 ZNF512Q96ME7 567 aaPredicted RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 PBX4Q9BYU1 374 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 RXFP1Q9HBX9 757 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 OLA1Q9NTK5 396 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 DDX56Q9NY93 547 aaKnown RBP10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SNX12Q9UMY4 172 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 YIPF1Q9Y548 306 aa10.75□□□□□ -0.69
PRPF38A-202ENST00000474048 SYNJ2BP-COX16A0A087WUM0 186 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC38A8A6NNN8 435 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 H3BNC9 293 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 DPYSL4O14531 572 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 NCK2O43639 380 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SOAT2O75908 522 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 ABLIM3O94929 683 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 F9P00740 461 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 PTPN9P43378 593 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 DEUP1Q05D60 604 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 TWF1Q12792 350 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 ARL13BQ3SXY8 428 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 PPM1LQ5SGD2 360 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SDHAF4Q5VUM1 108 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 GPRIN1Q7Z2K8 1008 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SLFN11Q7Z7L1 901 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 NT5DC3Q86UY8 548 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 MON1AQ86VX9 555 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 TCEAL8Q8IYN2 117 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 DEFB106AQ8N104 65 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 NIPA2Q8N8Q9 360 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 MRPL43Q8N983 215 aaKnown RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC7A14Q8TBB6 771 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 GPR152Q8TDT2 470 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 FAM172AQ8WUF8 416 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 TIFAQ96CG3 184 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 RBM41Q96IZ5 413 aaKnown RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 CFAP57Q96MR6 1250 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 KLHL5Q96PQ7 755 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 PSMB7Q99436 277 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 GOLPH3Q9H4A6 298 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 CERS4Q9HA82 394 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 COX16Q9P0S2 106 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 PACSIN2Q9UNF0 486 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 ASB3Q9Y575 518 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 INSL5Q9Y5Q6 135 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 IRAK3Q9Y616 596 aa10.74□□□□□ -0.69
PRPF38A-202ENST00000474048 GOLGA6L10A0A0M3HER8 536 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TCRBV5S1A1TA0A578 114 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 C2orf71A6NGG8 1288 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 C2CD4BA6NLJ0 364 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 YJEFN3A6XGL0 299 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 HHLA1C9JL84 531 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 E7ENQ6 273 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 M0QYT0 321 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 GRM6O15303 877 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 ADAM12O43184 909 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TGM5O43548 720 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 CEP104O60308 925 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 XYLBO75191 536 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 FGF19O95750 216 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 KRT1P04264 644 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 C8AP07357 584 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms