RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TSSK4Q6SA08 328 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 Q6ZS52 159 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 ASCL5Q7RTU5 278 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 CREBRFQ8IUR6 639 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 LSM7Q9UK45 103 aaKnown RBP16.44■□□□□ 0.22
MRPL55-226ENST00000473066 PCDHB4Q9Y5E5 795 aa16.44■□□□□ 0.22
MRPL55-226ENST00000473066 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-226ENST00000473066 HHLA1C9JL84 531 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 SCAMP3O14828 347 aaKnown RBP16.43■□□□□ 0.22
MRPL55-226ENST00000473066 ATG13O75143 517 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 RALAP11233 206 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 VDRP11473 427 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
MRPL55-226ENST00000473066 KIF11P52732 1056 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 SATB1Q01826 763 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 FBXO43Q4G163 708 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 FSTL4Q6MZW2 842 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 TMEM270Q6UE05 265 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 CCDC186Q7Z3E2 898 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 OTUB2Q96DC9 234 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
MRPL55-226ENST00000473066 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
MRPL55-226ENST00000473066 HINFPQ9BQA5 517 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 LINC00597Q9H2U6 94 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 TSPAN16Q9UKR8 245 aa16.43■□□□□ 0.22
MRPL55-226ENST00000473066 A0A1W2PQH9 124 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 CYP17A1P05093 508 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 ZXDBP98169 803 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 BST2Q10589 180 aaKnown RBP16.42■□□□□ 0.22
MRPL55-226ENST00000473066 C10orf120Q5SQS8 335 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 PIGZQ86VD9 579 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 ANKRD52Q8NB46 1076 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 ACDQ96AP0 544 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 LRRC4Q9HBW1 653 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 CYLDQ9NQC7 956 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
MRPL55-226ENST00000473066 SPAG17Q6Q759 2223 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RNF40O75150 1001 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 EGFP01133 1207 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 PAEPP09466 180 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 ADH5P11766 374 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RARGP13631 454 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 MTIF2P46199 727 aaKnown RBP16.41■□□□□ 0.22
MRPL55-226ENST00000473066 GALK1P51570 392 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 GAS6Q14393 721 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 DHCR24Q15392 516 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 STILQ15468 1287 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 BTBD8Q5XKL5 378 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
MRPL55-226ENST00000473066 FAM114A1Q8IWE2 563 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 INTS2Q9H0H0 1204 aaKnown RBP16.41■□□□□ 0.22
MRPL55-226ENST00000473066 DNMT3LQ9UJW3 386 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RAB23Q9ULC3 237 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 SLC8A2Q9UPR5 921 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RALGAPA1Q6GYQ0 2036 aa16.41■□□□□ 0.22
MRPL55-226ENST00000473066 RIF1Q5UIP0 2472 aaKnown RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 PTPRZ1P23471 2315 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 XPO1O14980 1071 aaKnown RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 PAPSS2O95340 614 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 GCNT1Q02742 428 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 PDE4CQ08493 712 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 KLHDC10Q6PID8 442 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 SIX6OS1Q8N1H7 587 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 UBR7Q8N806 425 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 RBBP8NLQ8NC74 664 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 ZBTB44Q8NCP5 570 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 EHBP1Q8NDI1 1231 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 FAM81BQ96LP2 452 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 NMUR1Q9HB89 426 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
MRPL55-226ENST00000473066 CLIC5Q9NZA1 410 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 STRIP2Q9ULQ0 834 aa16.4■□□□□ 0.22
MRPL55-226ENST00000473066 O00370 1275 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 KRT5P13647 590 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 TKTL1P51854 596 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 GAD2Q05329 585 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 NAIF1Q69YI7 327 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-226ENST00000473066 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 BBS7Q8IWZ6 715 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 NELL1Q92832 810 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 NCDNQ9UBB6 729 aa16.39■□□□□ 0.21
MRPL55-226ENST00000473066 SMG5Q9UPR3 1016 aaKnown RBP16.39■□□□□ 0.21
MRPL55-226ENST00000473066 USP3Q9Y6I4 520 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms