RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 CTHRC1Q96CG8 243 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 ZNF668Q96K58 619 aaPredicted RBP4.53□□□□□ -1.68
COMMD3-211ENST00000472673 HIST1H2AAQ96QV6 131 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 NRIP3Q9NQ35 241 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 PDGFCQ9NRA1 345 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 SNX15Q9NRS6 342 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 ASIC5Q9NY37 505 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 MGAT4CQ9UBM8 478 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 RIMKLBQ9ULI2 386 aa4.53□□□□□ -1.68
COMMD3-211ENST00000472673 ZNF804BA4D1E1 1349 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 TCRBV5S1A1TA0A578 114 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 RHPN2P1A8MT19 583 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 ADAMTS3O15072 1205 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 SNX2O60749 519 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 PARNO95453 639 aaKnown RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 ANXA2P07355 339 aaKnown RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 CHRM5P08912 532 aaPredicted RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 CYP2A6P11509 494 aaPredicted RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 CD19P15391 556 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 PHKG2P15735 406 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 DIO1P49895 249 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 SUPT20HL1Q3ZLR7 823 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 DENND2CQ68D51 928 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 RNF44Q7L0R7 432 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 KRT78Q8N1N4 520 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 C8orf58Q8NAV2 365 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 ADAMTS18Q8TE60 1221 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 SMG7Q92540 1137 aaKnown RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 PHKBQ93100 1093 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 WDYHV1Q96HA8 205 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 CCDC17Q96LX7 622 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 ZNF778Q96MU6 729 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 FYTTD1Q96QD9 318 aaKnown RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 BRIP1Q9BX63 1249 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 UNKQ9C0B0 810 aaKnown RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 PNPLA8Q9NP80 782 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 CHPF2Q9P2E5 772 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 DNAJB11Q9UBS4 358 aa4.52□□□□□ -1.69
COMMD3-211ENST00000472673 ZNF70Q9UC06 446 aaPredicted RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 RGS17Q9UGC6 210 aaPredicted RBP4.52□□□□□ -1.69
COMMD3-211ENST00000472673 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 FOXN3O00409 490 aaPredicted RBP4.51□□□□□ -1.69
COMMD3-211ENST00000472673 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 APEHP13798 732 aaKnown RBP4.51□□□□□ -1.69
COMMD3-211ENST00000472673 YY1P25490 414 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 ARHGAP25P42331 645 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 HTRA4P83105 476 aaPredicted RBP4.51□□□□□ -1.69
COMMD3-211ENST00000472673 DAG1Q14118 895 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 MANEALQ5VSG8 457 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 RRAGBQ5VZM2 374 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 MZT2AQ6P582 158 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 SLC2A7Q6PXP3 512 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 CLEC9AQ6UXN8 241 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 USP49Q70CQ1 688 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 CNGA4Q8IV77 575 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 METTL25Q8N6Q8 603 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 IQCDQ96DY2 449 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 DDX21Q9NR30 783 aaKnown RBP eCLIP4.51□□□□□ -1.69
COMMD3-211ENST00000472673 NKX1-2Q9UD57 310 aaPredicted RBP4.51□□□□□ -1.69
COMMD3-211ENST00000472673 STEAP1Q9UHE8 339 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 FAM50BQ9Y247 325 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 HPSEQ9Y251 543 aa4.51□□□□□ -1.69
COMMD3-211ENST00000472673 WDR17Q8IZU2 1322 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 SMIM35A0A1B0GVV1 85 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 KCNU1A8MYU2 1149 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 BTBD19C9JJ37 291 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 KPNA5O15131 536 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 IL18RAPO95256 599 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 MT-CO3P00414 261 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 A1BGP04217 495 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 RBL1P28749 1068 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 MCM5P33992 734 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 PIK3CBP42338 1070 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 SSBP2P81877 361 aaPredicted RBP4.5□□□□□ -1.69
COMMD3-211ENST00000472673 AWAT1Q58HT5 328 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 TMEM65Q6PI78 240 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 CCDC33Q8N5R6 958 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 NGDNQ8NEJ9 315 aaKnown RBP4.5□□□□□ -1.69
COMMD3-211ENST00000472673 MAFAQ8NHW3 353 aaPredicted RBP4.5□□□□□ -1.69
COMMD3-211ENST00000472673 HS6ST2Q96MM7 605 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 EFHD1Q9BUP0 239 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 C1QTNF7Q9BXJ2 289 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 HEYLQ9NQ87 328 aaPredicted RBP4.5□□□□□ -1.69
COMMD3-211ENST00000472673 KLHL13Q9P2N7 655 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 ASAP1Q9ULH1 1129 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 CAPN11Q9UMQ6 739 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 SLC27A6Q9Y2P4 619 aa4.5□□□□□ -1.69
COMMD3-211ENST00000472673 A8MVJ9 347 aa4.49□□□□□ -1.69
COMMD3-211ENST00000472673 THAP12O43422 761 aa4.49□□□□□ -1.69
COMMD3-211ENST00000472673 EIF4A1P60842 406 aaKnown RBP4.49□□□□□ -1.69
COMMD3-211ENST00000472673 DEUP1Q05D60 604 aa4.49□□□□□ -1.69
COMMD3-211ENST00000472673 ZNF543Q08ER8 600 aa4.49□□□□□ -1.69
COMMD3-211ENST00000472673 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-211ENST00000472673 ZNF268Q14587 947 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-211ENST00000472673 ST3GAL2Q16842 350 aa4.49□□□□□ -1.69
COMMD3-211ENST00000472673 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms