RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 FNIP1Q8TF40 1166 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 TCP11Q8WWU5 503 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PSPC1Q8WXF1 523 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 CRYGNQ8WXF5 182 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CPA5Q8WXQ8 436 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 ALG3Q92685 438 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PHKBQ93100 1093 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 IGSF21Q96ID5 467 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 LSG1Q9H089 658 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 RNF38Q9H0F5 515 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 S1PR5Q9H228 398 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 IL25Q9H293 177 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PLEKHA4Q9H4M7 779 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 POMKQ9H5K3 350 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 RSAD1Q9HA92 442 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 GPR27Q9NS67 375 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 AGPAT5Q9NUQ2 364 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 SPATA6Q9NWH7 488 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 WNT16Q9UBV4 365 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 NAP1L2Q9ULW6 460 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 TELO2Q9Y4R8 837 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PMF1-BGLAPU3KQ54 211 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CACNA1HO95180 2353 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 ZDBF2Q9HCK1 2354 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 DCHS1Q96JQ0 3298 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 H0Y858 1186 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 TBX3O15119 743 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PRPF3O43395 683 aaKnown RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 CHMP2AO43633 222 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 MARCH6O60337 910 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CLASP2O75122 1294 aaKnown RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 MAFO75444 373 aaPredicted RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 DEXIO95424 95 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CXCL14O95715 111 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SOD2P04179 222 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 ALDH2P05091 517 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 KLRC2P26717 231 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 ID4P47928 161 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 GLUD2P49448 558 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 GATMP50440 423 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SLURP1P55000 103 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 NLRP5P59047 1200 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PSMC5P62195 406 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PFKPQ01813 784 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 ELAVL2Q12926 359 aaKnown RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 HSP90AA2PQ14568 343 aaPredicted RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 MXD4Q14582 209 aaPredicted RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 NECTIN1Q15223 517 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PTPN14Q15678 1187 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CR1LQ2VPA4 569 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 FAM209AQ5JX71 171 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CLLU1OSQ5K130 101 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 RARS2Q5T160 578 aaKnown RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 LIN9Q5TKA1 542 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 JAKMIP3Q5VZ66 844 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 BLOC1S2Q6QNY1 142 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 MTSS1LQ765P7 747 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CEP68Q76N32 757 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 RTL10Q7L3V2 364 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 OTUD6AQ7L8S5 288 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 MIER3Q7Z3K6 550 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 B3GNT8Q7Z7M8 397 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 GPR149Q86SP6 731 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PROSER1Q86XN7 944 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 RHPN2Q8IUC4 686 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 LILRB2Q8N423 598 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 LRRC71Q8N4P6 559 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 LINC00482Q8N8I6 264 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CYP2W1Q8TAV3 490 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SH3RF2Q8TEC5 729 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 KCTD13Q8WZ19 329 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 WASF1Q92558 559 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SLC5A5Q92911 643 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CCDC136Q96JN2 1154 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 FAM20AQ96MK3 541 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 BDH2Q9BUT1 245 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 HERC2P3Q9BVR0 1158 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 TRIM6Q9C030 488 aaPredicted RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 LUC7LQ9NQ29 371 aaKnown RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 TBC1D13Q9NVG8 400 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 ZDHHC7Q9NXF8 308 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SUCLA2Q9P2R7 463 aaPredicted RBP3.88□□□□□ -1.79
XRN1-209ENST00000472625 EPS15L1Q9UBC2 864 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 PFDN2Q9UHV9 154 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 FAN1Q9Y2M0 1017 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 COL4A3BPQ9Y5P4 624 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 CLUHO75153 1309 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 SF3B1O75533 1304 aaKnown RBP eCLIP3.88□□□□□ -1.799e-7■■■■■ 57.4
XRN1-209ENST00000472625 PHLPP2Q6ZVD8 1323 aa3.88□□□□□ -1.79
XRN1-209ENST00000472625 TECTAO75443 2155 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 CYP3A7-CYP3A51PA0A087WV96 503 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TRAV20A0A0B4J274 112 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 IGKV6-21A0A0C4DH24 114 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 CCDC194A0A1B0GVG4 234 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 hCG_1642624A0A1W2PR95 340 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TCRBV5S2A0A599 114 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 H7BY64 318 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 INPPL1O15357 1258 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms