RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 GLE1Q53GS7 698 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 SHEQ5VZ18 495 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ATL3Q6DD88 541 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 C8orf74Q6P047 294 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 DEGS2Q6QHC5 323 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 HTR3DQ70Z44 454 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PTF1AQ7RTS3 328 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 FAM124AQ86V42 546 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TSPYL5Q86VY4 417 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 CNTN4Q8IWV2 1026 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PALM2Q8IXS6 379 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 HACE1Q8IYU2 909 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 HIPK4Q8NE63 616 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 OR1N1Q8NGS0 311 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 OR6S1Q8NH40 331 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 OR2W6PQ8NHA6 318 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PIP4K2CQ8TBX8 421 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TNFRSF25Q93038 417 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SMARCE1Q969G3 411 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SNX27Q96L92 541 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 WRNIP1Q96S55 665 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 BTBD2Q9BX70 525 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 NUSAP1Q9BXS6 441 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 NFKBIZQ9BYH8 718 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 UPF3BQ9BZI7 483 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 API5Q9BZZ5 524 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 EHD4Q9H223 541 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 KCNH6Q9H252 994 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 MRM3Q9HC36 420 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 GPAMQ9HCL2 828 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 FARSBQ9NSD9 589 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 ASNSD1Q9NWL6 643 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 RGL1Q9NZL6 768 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SENP1Q9P0U3 644 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ATXN7L1Q9ULK2 861 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 SCAF8Q9UPN6 1271 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 PCDHB6Q9Y5E3 794 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 BACE2Q9Y5Z0 518 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GMEB1Q9Y692 573 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 COMMD3-BMI1R4GMX3 469 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 DHX29Q7Z478 1369 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 LOC100653049A0A140TA62 436 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SERTM2A0A1B0GWG4 89 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 A0A1W2PQ67 120 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 A0A1W2PRV1 198 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TCRBV16S1A1N1A0A5B0 115 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 MEX3AA1L020 520 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 HEATR9A2RTY3 570 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 LCHNA4D1U4 455 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GOLGA6L4A6NEF3 574 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 H3BML4 177 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SOCS6O14544 535 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 DNALI1O14645 258 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 PGRMC2O15173 223 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 CYP27B1O15528 508 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TRAPPC3O43617 180 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TBC1D4O60343 1298 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ATP5HO75947 161 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 KRT34O76011 436 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 CLPTM1O96005 669 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 CHRNA1P02708 482 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 HMGCRP04035 888 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ASLP04424 464 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 VSIG8P0DPA2 414 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ZFXP17010 805 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 PLCG1P19174 1290 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GSTT1P30711 240 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 IGFALSP35858 605 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GP5P40197 560 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 STAT5AP42229 794 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GPR3P46089 330 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ME1P48163 572 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ATXN3P54252 364 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 CASP9P55211 416 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 HNRNPH2P55795 449 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 SSTP61278 116 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PHEXP78562 749 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ASPHQ12797 758 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 MSLNQ13421 630 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 FZD5Q13467 585 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ITGA7Q13683 1181 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PLS1Q14651 629 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PDK1Q15118 436 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SGCAQ16586 387 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 MOGQ16653 247 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 KYAT1Q16773 422 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 C2orf76Q3KRA6 126 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ZRANB3Q5FWF4 1079 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 NDUFAF5Q5TEU4 345 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 C12orf60Q5U649 245 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 RASIP1Q5U651 963 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 KANK2Q63ZY3 851 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TBC1D9BQ66K14 1250 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 DENND5AQ6IQ26 1287 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 RANBP10Q6VN20 620 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 RHOUQ7L0Q8 258 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 REC114Q7Z4M0 266 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 DENND1CQ8IV53 801 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms