RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	ULBP1	Q9BZM6	244 aa		11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	MRPL17	Q9NRX2	175 aa	Known RBP	11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	ABI2	Q9NYB9	513 aa	Predicted RBP	11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	HCST	Q9UBK5	93 aa		11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	USP18	Q9UMW8	372 aa		11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	IRAK3	Q9Y616	596 aa		11.3	□□□□□ -0.6
RPS18-231	ENST00000472218	TARSL2	A2RTX5	802 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PDE2A	O00408	941 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TLL1	O43897	1013 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PRPSAP2	O60256	369 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	LILRB3	O75022	631 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	FGF18	O76093	207 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	GJB6	O95452	261 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TRUB2	O95900	331 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	FGG	P02679	453 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PYGM	P11217	842 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	ATF2	P15336	505 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	MCM3	P25205	808 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	MIP	P30301	263 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	BMPR1A	P36894	532 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PBX3	P40426	434 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	NDUFV1	P49821	464 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	SLC5A3	P53794	718 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CACNA2D1	P54289	1103 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	EPHB4	P54760	987 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TAS2R40	P59535	323 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	RNASE9	P60153	205 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	ROR1	Q01973	937 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TAZ	Q16635	292 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CCDC142	Q17RM4	750 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PDE12	Q6L8Q7	609 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	FAM117B	Q6P1L5	589 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TAS1R1	Q7RTX1	841 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	VPS52	Q8N1B4	723 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	ARFGAP1	Q8N6T3	406 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	GPR161	Q8N6U8	529 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	EMC1	Q8N766	993 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	DPF3	Q92784	378 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	FAM149B1	Q96BN6	582 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CAPZA3	Q96KX2	299 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	PSMB7	Q99436	277 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TTLL2	Q9BWV7	592 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	SLITRK6	Q9H5Y7	841 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	ABCC13	Q9NSE7	274 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	TMEM30A	Q9NV96	361 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CLIC5	Q9NZA1	410 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	CDY1	Q9Y6F8	540 aa		11.29	□□□□□ -0.6
RPS18-231	ENST00000472218	KRIT1	O00522	736 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	DYNC1I1	O14576	645 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	CAPN9	O14815	690 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	TJP3	O95049	919 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	OR4Q2	P0C623	313 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	USP17L7	P0C7H9	530 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	GBP1	P32455	592 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	OR1D2	P34982	312 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	RDX	P35241	583 aa	Known RBP	11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	SSR1	P43307	286 aa	Known RBP	11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	PPP3CC	P48454	512 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	PLD1	Q13393	1074 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	NNT	Q13423	1086 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	CYP1B1	Q16678	543 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	LONRF2	Q1L5Z9	754 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	TFDP3	Q5H9I0	405 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	TRNP1	Q6NT89	227 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	DENND5B	Q6ZUT9	1274 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	BHLHA9	Q7RTU4	235 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	TADA2B	Q86TJ2	420 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	SCN4B	Q8IWT1	228 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	TCEAL8	Q8IYN2	117 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	DEFB106A	Q8N104	65 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	ATAD1	Q8NBU5	361 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	PDZD8	Q8NEN9	1154 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	FAM71B	Q8TC56	605 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	FAM172A	Q8WUF8	416 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	NTAN1	Q96AB6	310 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	PIWIL1	Q96J94	861 aa	Known RBP	11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	CLSTN3	Q9BQT9	956 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	OSBPL8	Q9BZF1	889 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	ZBP1	Q9H171	429 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	OLA1	Q9NTK5	396 aa	Known RBP	11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	UST	Q9Y2C2	406 aa		11.28	□□□□□ -0.6
RPS18-231	ENST00000472218	UQCRHL	A0A096LP55	91 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	WDR27	A2RRH5	827 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	YJEFN3	A6XGL0	299 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218		E7ENQ6	273 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	PIK3R2	O00459	728 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	GRAP2	O75791	330 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	ZNF189	O75820	626 aa	Predicted RBP	11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	KRT1	P04264	644 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	UQCRH	P07919	91 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	CSH1	P0DML2	217 aa		11.27	□□□□□ -0.61
RPS18-231	ENST00000472218	CSH2	P0DML3	217 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms