RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SAE1Q9UBE0 346 aaPredicted RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 IKBKGQ9Y6K9 419 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 CLUHO75153 1309 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 TYROBPO43914 113 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 ATP5HO75947 161 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 FAM155BO75949 473 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 CA4P22748 312 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 ALDH3A1P30838 453 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 GNL1P36915 607 aaPredicted RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 TAF6P49848 677 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 CPT1AP50416 773 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 SLC8A3P57103 927 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 PDE4CQ08493 712 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 KCNJ11Q14654 390 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 TAF5Q15542 800 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 SEPT7Q16181 437 aaKnown RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 DPYSL2Q16555 572 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 C15orf59Q2T9L4 293 aaPredicted RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 SV2CQ496J9 727 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 FNBP1LQ5T0N5 605 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 ANKRD22Q5VYY1 191 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 FBXW10Q5XX13 1052 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 SCYL2Q6P3W7 929 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 STRADAQ7RTN6 431 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 MCUQ8NE86 351 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 LRRC8CQ8TDW0 803 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 FBF1Q8TES7 1133 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
APLF-204ENST00000471727 FERMT1Q9BQL6 677 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 KATNAL1Q9BW62 490 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 SNX25Q9H3E2 840 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 USP29Q9HBJ7 922 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 NGRNQ9NPE2 291 aaKnown RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 RCOR3Q9P2K3 495 aaPredicted RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
APLF-204ENST00000471727 EVPLQ92817 2033 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 PLXNA1Q9UIW2 1896 aa11.07□□□□□ -0.64
APLF-204ENST00000471727 KPNA7A9QM74 516 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 GOLGA8MH3BSY2 632 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 PAPSS1O43252 624 aaPredicted RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 HUS1O60921 280 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 RECQL4O94761 1208 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TMEM63AO94886 807 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ZBED1O96006 694 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 IL4RP24394 825 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 RGS7P49802 495 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 MFSD10Q14728 455 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SOWAHAQ2M3V2 549 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 GALNTL6Q49A17 601 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SPDYAQ5MJ70 313 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TRNP1Q6NT89 227 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 LIMS2Q7Z4I7 341 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 FUKQ8N0W3 1084 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TOP6BLQ8N6T0 577 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 C12orf29Q8N999 325 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 CCDC63Q8NA47 563 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 APPL2Q8NEU8 664 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ZNF398Q8TD17 642 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 MAGEC3Q8TD91 643 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 PAFAH2Q99487 392 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 C11orf84Q9BUA3 381 aaPredicted RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 TMEM51Q9NW97 253 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TEX264Q9Y6I9 313 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 MCM3APO60318 1980 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 PLXNB2O15031 1838 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SCN4AP35499 1836 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SMIM28A0A1B0GU29 152 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 HAS3O00219 553 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 KCNN4O15554 427 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 GCATO75600 419 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ALADP13716 330 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TPSB2P20231 275 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 WARSP23381 471 aaKnown RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 SSTR1P30872 391 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 PSEN2P49810 448 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 CRYBB1P53674 252 aaPredicted RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 ADAM17P78536 824 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SARNPP82979 210 aaKnown RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 ZNF200P98182 395 aaPredicted RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 ATP11AP98196 1134 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 BNIP1Q12981 228 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 SETDB1Q15047 1291 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 TPSAB1Q15661 275 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 CDO1Q16878 200 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ZC3H18Q86VM9 953 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms