RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KRTAP10-11P60412 298 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 SLC29A2Q14542 456 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 RNASE12Q5GAN4 147 aaKnown RBP6.71□□□□□ -1.34
CCDC39-202ENST00000471307 FCRL6Q6DN72 434 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 SLC18B1Q6NT16 456 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 PTCHD4Q6ZW05 846 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 FAM156AQ8NDB6 213 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 IPCEF1Q8WWN9 437 aaPredicted RBP6.71□□□□□ -1.34
CCDC39-202ENST00000471307 ZCWPW1Q9H0M4 648 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 ZNF287Q9HBT7 754 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 SNX15Q9NRS6 342 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 COL20A1Q9P218 1284 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 CTTNBP2Q8WZ74 1663 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 CLIP1P30622 1438 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 AQP7P3A6NL99 342 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 VSTM5A8MXK1 200 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 RASAL1O95294 804 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 ZKSCAN1P17029 563 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-202ENST00000471307 PTDSS1P48651 473 aaKnown RBP6.7□□□□□ -1.34
CCDC39-202ENST00000471307 NPY5RQ15761 445 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 KIAA0753Q2KHM9 967 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 YAF2Q8IY57 180 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 ADAMTS18Q8TE60 1221 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
CCDC39-202ENST00000471307 STK31Q9BXU1 1019 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 HDAC9Q9UKV0 1011 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 CHD1O14646 1710 aa6.7□□□□□ -1.34
CCDC39-202ENST00000471307 CES2O00748 559 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 TXNP10599 105 aaKnown RBP6.69□□□□□ -1.34
CCDC39-202ENST00000471307 FPR3P25089 353 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 ACVR2AP27037 513 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 MPGP29372 298 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 CPT1AP50416 773 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 RPS16P62249 146 aaKnown RBP6.69□□□□□ -1.34
CCDC39-202ENST00000471307 ZNF750Q32MQ0 723 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 C3orf38Q5JPI3 329 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 PPP4R4Q6NUP7 873 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 MZT2AQ6P582 158 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 SERPINA13PQ6UXR4 307 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 DPY19L3Q6ZPD9 716 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 BCDIN3DQ7Z5W3 292 aaKnown RBP6.69□□□□□ -1.34
CCDC39-202ENST00000471307 CTHRC1Q96CG8 243 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 MMS19Q96T76 1030 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 BTBD1Q9H0C5 482 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 BHMT2Q9H2M3 363 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
CCDC39-202ENST00000471307 G3BP2Q9UN86 482 aaKnown RBP6.69□□□□□ -1.34
CCDC39-202ENST00000471307 IQGAP2Q13576 1575 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 CEP170Q5SW79 1584 aa6.69□□□□□ -1.34
CCDC39-202ENST00000471307 CYP2D7A0A087X1C5 515 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 TCRBV5S1A1TA0A578 114 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 H7C4K7 107 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 TMPRSS11DO60235 418 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 PIAS2O75928 621 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 PEX2P28328 305 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 FAM187BQ17R55 369 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 C11orf87Q6NUJ2 197 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 ZNF813Q6ZN06 617 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 C5orf34Q96MH7 638 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
CCDC39-202ENST00000471307 PRSS22Q9GZN4 317 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 CHST8Q9H2A9 424 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 GAR1Q9NY12 217 aaKnown RBP6.68□□□□□ -1.34
CCDC39-202ENST00000471307 TBC1D30Q9Y2I9 924 aa6.68□□□□□ -1.34
CCDC39-202ENST00000471307 FRMPD2Q68DX3 1309 aaPredicted RBP6.68□□□□□ -1.34
CCDC39-202ENST00000471307 UGGT2Q9NYU1 1516 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 MAP4K4O95819 1239 aaPredicted RBP6.67□□□□□ -1.34
CCDC39-202ENST00000471307 MT-CO3P00414 261 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 CYP2A6P11509 494 aaPredicted RBP6.67□□□□□ -1.34
CCDC39-202ENST00000471307 CD19P15391 556 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 TPH1P17752 444 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 PTGER1P34995 402 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 PGDP52209 483 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 PSG6Q00889 435 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 GRM3Q14832 879 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 KCTD20Q7Z5Y7 419 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 SESTD1Q86VW0 696 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 SDR16C5Q8N3Y7 309 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 LINC01465Q8N7H1 131 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 NGDNQ8NEJ9 315 aaKnown RBP6.67□□□□□ -1.34
CCDC39-202ENST00000471307 CCDC17Q96LX7 622 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 ASIC5Q9NY37 505 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 OBP2AQ9NY56 170 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 DKK4Q9UBT3 224 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
CCDC39-202ENST00000471307 EFCAB5A4FU69 1503 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 A8MVJ9 347 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 TMEM232C9JQI7 657 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
CCDC39-202ENST00000471307 IL1R1P14778 569 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 RHCEP18577 417 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 GATMP50440 423 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 ALDH5A1P51649 535 aaPredicted RBP6.66□□□□□ -1.34
CCDC39-202ENST00000471307 RHDQ02161 417 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 LMAN2Q12907 356 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 DAZAP2Q15038 168 aaPredicted RBP6.66□□□□□ -1.34
CCDC39-202ENST00000471307 SUPT20HL1Q3ZLR7 823 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 MIS18BP1Q6P0N0 1132 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 DENND1AQ8TEH3 1009 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 STRBPQ96SI9 672 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms