RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 NOMO3P69849 1222 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 DEFB103AP81534 67 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PLAURQ03405 335 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 TRPC3Q13507 836 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 HLTFQ14527 1009 aaKnown RBP eCLIP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 MBTPS1Q14703 1052 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 SLMAPQ14BN4 828 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ACAP1Q15027 740 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PTPROQ16827 1216 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ZNF568Q3ZCX4 644 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ATF7IP2Q5U623 682 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 TTC39BQ5VTQ0 682 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PLEKHA7Q6IQ23 1121 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 CRELD2Q6UXH1 353 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 MON1BQ7L1V2 547 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 POLNQ7Z5Q5 900 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 RHOT1Q8IXI2 618 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 KATNAL2Q8IYT4 538 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 IQCKQ8N0W5 287 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 CNPY4Q8N129 248 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 MICALL1Q8N3F8 863 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 NME8Q8N427 588 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 UBR7Q8N806 425 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 NIPA2Q8N8Q9 360 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 RBBP8NLQ8NC74 664 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PPP1R13LQ8WUF5 828 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ARNTL2Q8WYA1 636 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 EDEM1Q92611 657 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 WNT8BQ93098 351 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 TOP1MTQ969P6 601 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ARHGEF26Q96DR7 871 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 RBM41Q96IZ5 413 aaKnown RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 MS4A14Q96JA4 679 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 FMO2Q99518 471 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 SH2D3AQ9BRG2 576 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ADPGKQ9BRR6 497 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ERP44Q9BS26 406 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 TCHPQ9BT92 498 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 INO80BQ9C086 356 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 FAM107BQ9H098 131 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 LHX5Q9H2C1 402 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 RPF1Q9H9Y2 349 aaKnown RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PTPRHQ9HD43 1115 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PRDM6Q9NQX0 595 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 SETD4Q9NVD3 440 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 TAS2R14Q9NYV8 317 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 VPS18Q9P253 973 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 IP6K2Q9UHH9 426 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 KIAA1257Q9ULG3 409 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 PACSIN2Q9UNF0 486 aaPredicted RBP5.98□□□□□ -1.45
HDAC8-216ENST00000470998 EFR3BQ9Y2G0 817 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 RWDD3Q9Y3V2 267 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 C2CD2Q9Y426 696 aa5.98□□□□□ -1.45
HDAC8-216ENST00000470998 LINC01553A4QN01 128 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ZBTB42B2RXF5 422 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 INO80B-WBP1J3KQ70 363 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ABLIM1O14639 778 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 FSCN2O14926 492 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 POLR3GO15318 223 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 XPOTO43592 962 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 SORBS3O60504 671 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PPFIA2O75334 1257 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ZNF189O75820 626 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 RGS9O75916 674 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ECEL1O95672 775 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 SYF2O95926 243 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ALBP02768 609 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 RB1P06400 928 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 NUDT17P0C025 328 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MYZAPP0CAP1 466 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MYBL2P10244 700 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MMP8P22894 467 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ACTN2P35609 894 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 EIF1AXP47813 144 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 CARSP49589 748 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ACOT2P49753 483 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MBTD1Q05BQ5 628 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MGAT3Q09327 533 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 CALCOCO2Q13137 446 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PIGHQ14442 188 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 MESDQ14696 234 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 TRIP4Q15650 581 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 CCDC85BQ15834 202 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 GRIK4Q16099 956 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ZNF699Q32M78 642 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 DUPD1Q68J44 220 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PSAPL1Q6NUJ1 521 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 DRICH1Q6PGQ1 229 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ELMSAN1Q6PJG2 1045 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 TMEM270Q6UE05 265 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ZNF438Q7Z4V0 828 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ATCAYQ86WG3 371 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 SPATS2Q86XZ4 545 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PALB2Q86YC2 1186 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 SLC13A5Q86YT5 568 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 JAMLQ86YT9 394 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 KLHL7Q8IXQ5 586 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 LINC01465Q8N7H1 131 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 CCDC89Q8N998 374 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms