RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 LRTOMTQ8WZ04 291 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF764Q96H86 408 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 CDK19Q9BWU1 502 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 LRRC27Q9C0I9 530 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 MS4A7Q9GZW8 240 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 CPNE5Q9HCH3 593 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 A1CFQ9NQ94 594 aaKnown RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 ARHGEF3Q9NR81 526 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 OBP2AQ9NY56 170 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 ARPP21Q9UBL0 812 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 SH2B3Q9UQQ2 575 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 ITSN1Q15811 1721 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 CCDC7Q96M83 1385 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 ATP7BP35670 1465 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 AKAP12Q02952 1782 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 FAM135BQ49AJ0 1406 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 ADGRL3Q9HAR2 1447 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 MARF1Q9Y4F3 1742 aaKnown RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 hCG_1984214I3L0E3 225 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 TPP1O14773 563 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 C1QL1O75973 258 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 IL6RP08887 468 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 FAM163BP0C2L3 166 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 BRAFP15056 766 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 NDUFB7P17568 137 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 ATF3P18847 181 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 ITPKBP27987 946 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 CCT8P50990 548 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 DGKEP52429 567 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 SUMO3P55854 103 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 FAM193AP78312 1265 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 MRPS21P82921 87 aaKnown RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 NHLH1Q02575 133 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 GRM3Q14832 879 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 POLD3Q15054 466 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 CNGA2Q16280 664 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 KIAA0753Q2KHM9 967 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 PLA1AQ53H76 456 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 TREML2Q5T2D2 321 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 SYCE2Q6PIF2 218 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 MAVSQ7Z434 540 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 WDR53Q7Z5U6 358 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF280BQ86YH2 543 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 ATG4AQ8WYN0 398 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 SARAFQ96BY9 339 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 NMD3Q96D46 503 aaKnown RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 APIPQ96GX9 242 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 GLOD4Q9HC38 313 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 CPNE7Q9UBL6 633 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 MRPS17Q9Y2R5 130 aaKnown RBP4.98□□□□□ -1.61
COL9A1-206ENST00000470652 PIK3R4Q99570 1358 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 CD163L1Q9NR16 1453 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 CDC42BPGQ6DT37 1551 aa4.98□□□□□ -1.61
COL9A1-206ENST00000470652 MST1RQ04912 1400 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 MON2Q7Z3U7 1717 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 ROBO1Q9Y6N7 1651 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 MGEA5O60502 916 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 EBLN1P0CF75 366 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 MYF5P13349 255 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
COL9A1-206ENST00000470652 PDE6CP51160 858 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 DDX10Q13206 875 aaKnown RBP4.97□□□□□ -1.61
COL9A1-206ENST00000470652 ANKRD16Q6P6B7 361 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 MICU3Q86XE3 530 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 RASAL3Q86YV0 1011 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF384Q8TF68 577 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 RAPGEF4Q8WZA2 1011 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 MAML1Q92585 1016 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 SPSB4Q96A44 273 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 BHMT2Q9H2M3 363 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 XPNPEP3Q9NQH7 507 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 SACM1LQ9NTJ5 587 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 TRMT13Q9NUP7 481 aaKnown RBP4.97□□□□□ -1.61
COL9A1-206ENST00000470652 AFF4Q9UHB7 1163 aaKnown RBP4.97□□□□□ -1.61
COL9A1-206ENST00000470652 WNT6Q9Y6F9 365 aa4.97□□□□□ -1.61
COL9A1-206ENST00000470652 COL11A2P13942 1736 aaPredicted RBP4.97□□□□□ -1.61
COL9A1-206ENST00000470652 NRKQ7Z2Y5 1582 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 EIF3AQ14152 1382 aaKnown RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 A1L4Q6 167 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 MBD3L4A6NDZ8 208 aaPredicted RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 MBD3L3A6NE82 208 aaPredicted RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 LRRC3CA6NJW4 275 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 FESP07332 822 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 JUPP14923 745 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 RPL17P18621 184 aaKnown RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 DRD4P21917 467 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 KCNA3P22001 575 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 LIPAP38571 399 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 PRKAG1P54619 331 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 FMO1Q01740 532 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 SP2Q02086 613 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 ZIK1Q3SY52 487 aaPredicted RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 DCAF12L1Q5VU92 463 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 RP9Q8TA86 221 aaKnown RBP4.96□□□□□ -1.62
COL9A1-206ENST00000470652 PPP2R3CQ969Q6 453 aa4.96□□□□□ -1.62
COL9A1-206ENST00000470652 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms