RNA–Protein interactions for RNA: ENST00000470474.1

ATG7-222, Transcript of autophagy related 7, human

TSL 1 (best)

Gene ATG7, Length 534 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-222	ENST00000470474	GCLM	P48507	274 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	PGF	P49763	221 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	MRPS21	P82921	87 aa	Known RBP	18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	SF3A2	Q15428	464 aa	Known RBP	18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	RASSF3	Q86WH2	238 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	FAM186B	Q8IYM0	893 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	FBXO44	Q9H4M3	255 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.93	■□□□□ 0.62	2e-6	■■■■■ 149.1
ATG7-222	ENST00000470474	MYOF	Q9NZM1	2061 aa		18.93	■□□□□ 0.62
ATG7-222	ENST00000470474	SPTBN2	O15020	2390 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474		A0A0A0MRY4	1105 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	DCLK1	O15075	740 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	TLR5	O60602	858 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	KAT7	O95251	611 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	FAM200B	P0CF97	657 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	ADORA2B	P29275	332 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	MPL	P40238	635 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	DGKE	P52429	567 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	CRY1	Q16526	586 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	AASDH	Q4L235	1098 aa	Predicted RBP	18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	LY6G5C	Q5SRR4	150 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	CLEC20A	Q6ZU45	233 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	GPRIN1	Q7Z2K8	1008 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	BBS7	Q8IWZ6	715 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	PHTF2	Q8N3S3	785 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	CNOT6L	Q96LI5	555 aa	Known RBP	18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	HNRNPAB	Q99729	332 aa	Known RBP	18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	NIF3L1	Q9GZT8	377 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	CYP3A43	Q9HB55	503 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	SH3BP1	Q9Y3L3	701 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	SDK1	Q7Z5N4	2213 aa		18.92	■□□□□ 0.62
ATG7-222	ENST00000470474	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	HHLA1	C9JL84	531 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	HOXC11	O43248	304 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	CILP	O75339	1184 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ZNF202	O95125	648 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	APOD	P05090	189 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	KRT13	P13646	458 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	TRIM21	P19474	475 aa	Known RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	RPL13	P26373	211 aa	Known RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	PSMC2	P35998	433 aa	Known RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	KIR2DL1	P43626	348 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	LIMK1	P53667	647 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	MCCD1	P59942	119 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	GAD2	Q05329	585 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	KDSR	Q06136	332 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ADAM9	Q13443	819 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ELF2	Q15723	593 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ANO7	Q6IWH7	933 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ETFBKMT	Q8IXQ9	262 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	CCDC33	Q8N5R6	958 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ALLC	Q8N6M5	410 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	C12orf50	Q8NA57	414 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	IL17RC	Q8NAC3	791 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	MDGA1	Q8NFP4	955 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	WBP2	Q969T9	261 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	NT5C1A	Q9BXI3	368 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	TPSD1	Q9BZJ3	242 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	NACA2	Q9H009	215 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	TMEM8A	Q9HCN3	771 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	PNPLA8	Q9NP80	782 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	CYLD	Q9NQC7	956 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	ARHGEF4	Q9NR80	690 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	TLR8	Q9NR97	1041 aa	Known RBP	18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	RXFP3	Q9NSD7	469 aa		18.91	■□□□□ 0.62
ATG7-222	ENST00000470474	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	GRIA2	P42262	883 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	EDRF1	Q3B7T1	1238 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	HSF5	Q4G112	596 aa	Predicted RBP	18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	TMEM92	Q6UXU6	159 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	WHAMM	Q8TF30	809 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	CYFIP2	Q96F07	1278 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	SMOC1	Q9H4F8	434 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	MMRN2	Q9H8L6	949 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	GDPD2	Q9HCC8	539 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	VPS45	Q9NRW7	570 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	OSER1	Q9NX31	292 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	SCML2	Q9UQR0	700 aa		18.9	■□□□□ 0.62
ATG7-222	ENST00000470474	SGK1	O00141	431 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	CYP26A1	O43174	497 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	GREM1	O60565	184 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	RHOBTB1	O94844	696 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	KLF8	O95600	359 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	ADRB1	P08588	477 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	IRF1	P10914	325 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	CD58	P19256	250 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	TIE1	P35590	1138 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	USP39	Q53GS9	565 aa	Known RBP	18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	PPM1J	Q5JR12	505 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	PMS2CL	Q68D20	193 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	KRT39	Q6A163	491 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	C11orf74	Q86VG3	221 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	TXNDC5	Q8NBS9	432 aa	Known RBP	18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	JAKMIP2	Q96AA8	810 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	KLF16	Q9BXK1	252 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	SPHK2	Q9NRA0	654 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	PCDHA5	Q9Y5H7	936 aa		18.89	■□□□□ 0.61
ATG7-222	ENST00000470474	TULP3	O75386	442 aa		18.88	■□□□□ 0.61
ATG7-222	ENST00000470474	TBX18	O95935	607 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms