RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 USH1CQ9Y6N9 552 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 PLXNB2O15031 1838 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 SMAPO00193 183 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 NPTXRO95502 500 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 MMP3P08254 477 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 ROR1Q01973 937 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 RAB6CQ53S08 254 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 EFHC2Q5JST6 749 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 NPNTQ6UXI9 565 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 VSIG1Q86XK7 387 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 OSBPL1AQ9BXW6 950 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 RAB6CQ9H0N0 254 aa20.96■□□□□ 0.95
CDHR3-207ENST00000470188 XPO7Q9UIA9 1087 aaKnown RBP20.96■□□□□ 0.95
CDHR3-207ENST00000470188 SMG5Q9UPR3 1016 aaKnown RBP20.96■□□□□ 0.95
CDHR3-207ENST00000470188 TCRBV7S3A2A0A539 114 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 TMEM63AO94886 807 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 SMPD1P17405 629 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 SSTR1P30872 391 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 GEMIN4P57678 1058 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 BASP1P80723 227 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 TFDP2Q14188 446 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 NOMO1Q15155 1222 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 KIZQ2M2Z5 673 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 SPDYAQ5MJ70 313 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 DPP9Q86TI2 863 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 STK32AQ8WU08 396 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 MYLK2Q9H1R3 596 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 RABGEF1Q9UJ41 708 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 GINS2Q9Y248 185 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 SNX9Q9Y5X1 595 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 E7ESA3 106 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 DCTN3O75935 186 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 ASMTLO95671 621 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 CDC25CP30307 473 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 FOXN2P32314 431 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 RASSF2P50749 326 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 DPYSL3Q14195 570 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 FAM47CQ5HY64 1035 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 PPP1R26Q5T8A7 1209 aaPredicted RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 DARS2Q6PI48 645 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 RGS9BPQ6ZS82 235 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 ZC3H18Q86VM9 953 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 LMNTD2Q8IXW0 634 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 PDIK1LQ8N165 341 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 C4orf33Q8N1A6 199 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 ENDOVQ8N8Q3 282 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 FBXO36Q8NEA4 188 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 OR6J1Q8NGC5 347 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 MRPL45Q9BRJ2 306 aaKnown RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 CXCL16Q9H2A7 254 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 PLEKHA5Q9HAU0 1116 aa20.95■□□□□ 0.94
CDHR3-207ENST00000470188 ZMYND8Q9ULU4 1186 aaPredicted RBP20.95■□□□□ 0.94
CDHR3-207ENST00000470188 BTBD19C9JJ37 291 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 ALDH3A1P30838 453 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 STIP1P31948 543 aaKnown RBP20.94■□□□□ 0.94
CDHR3-207ENST00000470188 SLC18A1P54219 525 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 SARNPP82979 210 aaKnown RBP20.94■□□□□ 0.94
CDHR3-207ENST00000470188 KRT81Q14533 505 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 CCDC14Q49A88 953 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 DUSP28Q4G0W2 176 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 WASHC2DQ5SRD0 308 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 C3orf62Q6ZUJ4 267 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 ACOT1Q86TX2 421 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.94■□□□□ 0.94
CDHR3-207ENST00000470188 DENND1AQ8TEH3 1009 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 LRRC37BQ96QE4 947 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 WDR83Q9BRX9 315 aaKnown RBP20.94■□□□□ 0.94
CDHR3-207ENST00000470188 SNTG2Q9NY99 539 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 FETUBQ9UGM5 382 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 DERAQ9Y315 318 aa20.94■□□□□ 0.94
CDHR3-207ENST00000470188 PEX11AO75192 247 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 LINGO3P0C6S8 592 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 MRPS35P82673 323 aaKnown RBP20.93■□□□□ 0.94
CDHR3-207ENST00000470188 TMEM62Q0P6H9 643 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 SPARCL1Q14515 664 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 DGKDQ16760 1214 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 BBS9Q3SYG4 887 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 PMF1Q6P1K2 205 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 APBB1IPQ7Z5R6 666 aaPredicted RBP20.93■□□□□ 0.94
CDHR3-207ENST00000470188 TTC30AQ86WT1 665 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 MAP7D3Q8IWC1 876 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 PALM2Q8IXS6 379 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 CFAP61Q8NHU2 1237 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 ERP27Q96DN0 273 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 SETD4Q9NVD3 440 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 SLC45A1Q9Y2W3 748 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 CITO14578 2027 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 PPEF2O14830 753 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 HOXD8P13378 290 aaPredicted RBP20.93■□□□□ 0.94
CDHR3-207ENST00000470188 PEX19P40855 299 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 NRLP54845 237 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 RNASELQ05823 741 aaKnown RBP20.93■□□□□ 0.94
CDHR3-207ENST00000470188 MTM1Q13496 603 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 EFTUD2Q15029 972 aaKnown RBP eCLIP20.93■□□□□ 0.948e-9■■■■□ 20.8
CDHR3-207ENST00000470188 KLHL38Q2WGJ6 581 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 SCYL2Q6P3W7 929 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 OLFML1Q6UWY5 402 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 KCNV2Q8TDN2 545 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 SNX27Q96L92 541 aa20.93■□□□□ 0.94
CDHR3-207ENST00000470188 ZMAT2Q96NC0 199 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms