RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 DKC1O60832 514 aaKnown RBP eCLIP12.58□□□□□ -0.4
VARS2-205ENST00000469358 AP1G2O75843 785 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 PIGRP01833 764 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 NFICP08651 508 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 RILPQ96NA2 401 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 TSC22D3Q99576 134 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 MAP3K20Q9NYL2 800 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 ZC3H7BQ9UGR2 993 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 E7ENQ6 273 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 INO80B-WBP1J3KQ70 363 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 LIN7AO14910 233 aaPredicted RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 C1QAP02745 245 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 HMGCRP04035 888 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 KCNJ11Q14654 390 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 FKBP1CQ5VVH2 108 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 POLNQ7Z5Q5 900 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 C12orf29Q8N999 325 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 SH3TC2Q8TF17 1288 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 INO80BQ9C086 356 aaPredicted RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 SPATS2LQ9NUQ6 558 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 TOM1L1O75674 476 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 MICAL2O94851 1124 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 KCNA3P22001 575 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 MRPS35P82673 323 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 SLC18A2Q05940 514 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 RIPOR1Q6ZS17 1223 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 CYP4V2Q6ZWL3 525 aaPredicted RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 CAND1Q86VP6 1230 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 CFAP61Q8NHU2 1237 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 ZNF398Q8TD17 642 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 PANX3Q96QZ0 392 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
VARS2-205ENST00000469358 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 MINDY3Q9H8M7 445 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 ARID2Q68CP9 1835 aa12.57□□□□□ -0.4
VARS2-205ENST00000469358 HMX2A2RU54 273 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 MAFGO15525 162 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 RNF8O76064 485 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 PRKCBP05771 671 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 DPEP1P16444 411 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 TFE3P19532 575 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 ADORA2AP29274 412 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ATXN1P54253 815 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 POLE2P56282 527 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 IRX1P78414 480 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 LAMTOR4Q0VGL1 99 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 OR52E8Q6IFG1 317 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 CMASQ8NFW8 434 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 RXFP2Q8WXD0 754 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 LPIN3Q9BQK8 851 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 USP29Q9HBJ7 922 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 CPSF3Q9UKF6 684 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 RFPL1O75677 317 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 TCF7P36402 384 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 STAT5BP51692 787 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 INHBEP58166 350 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 SLC25A3Q00325 362 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 OR6B2Q6IFH4 312 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 SLC26A11Q86WA9 606 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 NDUFAF2Q8N183 169 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ALKBH8Q96BT7 664 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 ZBED3Q96IU2 234 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 PCDHGC3Q9UN70 934 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 OGTO15294 1046 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ITGB3P05106 788 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 PDGFRAP16234 1089 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 CDH5P33151 784 aaPredicted RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ATG14Q6ZNE5 492 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 GSTCDQ8NEC7 633 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 HEXIM2Q96MH2 286 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
VARS2-205ENST00000469358 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ACAD9Q9H845 621 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 POPDC2Q9HBU9 364 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ACSS2Q9NR19 701 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 SLC7A8Q9UHI5 535 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 PLLPQ9Y342 182 aa12.56□□□□□ -0.4
VARS2-205ENST00000469358 ABLIM1O14639 778 aa12.55□□□□□ -0.4
VARS2-205ENST00000469358 ITM2AO43736 263 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms