RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 DCAF17Q5H9S7 520 aaPredicted RBP23.02■■□□□ 1.28
TTC28-204ENST00000468807 SNX30Q5VWJ9 437 aa23.02■■□□□ 1.28
TTC28-204ENST00000468807 CACNA2D4Q7Z3S7 1137 aa23.02■■□□□ 1.28
TTC28-204ENST00000468807 ERCC4Q92889 916 aaPredicted RBP23.02■■□□□ 1.28
TTC28-204ENST00000468807 ZFRQ96KR1 1074 aaKnown RBP23.02■■□□□ 1.28
TTC28-204ENST00000468807 HNRNPABQ99729 332 aaKnown RBP23.02■■□□□ 1.28
TTC28-204ENST00000468807 TSG101Q99816 390 aa23.02■■□□□ 1.28
TTC28-204ENST00000468807 FAM92AA1XBS5 289 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 K7EQS6 105 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 TLR5O60602 858 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 LRP3O75074 770 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 ZDHHC11BP0C7U3 371 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 GTF2H1P32780 548 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 PRCPP42785 496 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 PGFP49763 221 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 KDSRQ06136 332 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 LY6G5CQ5SRR4 150 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 TCERG1LQ5VWI1 586 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 RHBDF2Q6PJF5 856 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 CLEC20AQ6ZU45 233 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 GPRIN1Q7Z2K8 1008 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 KBTBD6Q86V97 674 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 TTC30AQ86WT1 665 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 TSTD1Q8NFU3 115 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 PNKPQ96T60 521 aa23.01■■□□□ 1.27
TTC28-204ENST00000468807 ANTXRLA6NF34 631 aa23■■□□□ 1.27
TTC28-204ENST00000468807 CYP26A1O43174 497 aa23■■□□□ 1.27
TTC28-204ENST00000468807 STX10O60499 249 aa23■■□□□ 1.27
TTC28-204ENST00000468807 CILPO75339 1184 aa23■■□□□ 1.27
TTC28-204ENST00000468807 SMC2O95347 1197 aa23■■□□□ 1.27
TTC28-204ENST00000468807 ACO1P21399 889 aaKnown RBP23■■□□□ 1.27
TTC28-204ENST00000468807 DGKEP52429 567 aa23■■□□□ 1.27
TTC28-204ENST00000468807 ZNF658Q5TYW1 1059 aaPredicted RBP23■■□□□ 1.27
TTC28-204ENST00000468807 C12orf40Q86WS4 652 aa23■■□□□ 1.27
TTC28-204ENST00000468807 BBS7Q8IWZ6 715 aa23■■□□□ 1.27
TTC28-204ENST00000468807 CCDC33Q8N5R6 958 aa23■■□□□ 1.27
TTC28-204ENST00000468807 USP33Q8TEY7 942 aa23■■□□□ 1.27
TTC28-204ENST00000468807 SEMA4DQ92854 862 aa23■■□□□ 1.27
TTC28-204ENST00000468807 SMARCE1Q969G3 411 aa23■■□□□ 1.27
TTC28-204ENST00000468807 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.99■■□□□ 1.27
TTC28-204ENST00000468807 MED19A0JLT2 244 aaPredicted RBP22.99■■□□□ 1.27
TTC28-204ENST00000468807 KAT7O95251 611 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 TBX18O95935 607 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 APODP05090 189 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 ATXN1P54253 815 aaKnown RBP22.99■■□□□ 1.27
TTC28-204ENST00000468807 CCDC6Q16204 474 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 CSRP2Q16527 193 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 ANO4Q32M45 955 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 BTBD8Q5XKL5 378 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 PRR23CQ6ZRP0 262 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 SFTPA1Q8IWL2 248 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 NAT16Q8N8M0 369 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 FBXL13Q8NEE6 735 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 WHAMMQ8TF30 809 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 OTUB2Q96DC9 234 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 HEXIM2Q96MH2 286 aaKnown RBP22.99■■□□□ 1.27
TTC28-204ENST00000468807 GSDMAQ96QA5 445 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 ARRDC1-AS1Q9H2J1 176 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 ARHGEF4Q9NR80 690 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 RAB20Q9NX57 234 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 HOOK1Q9UJC3 728 aaKnown RBP22.99■■□□□ 1.27
TTC28-204ENST00000468807 SCML2Q9UQR0 700 aa22.99■■□□□ 1.27
TTC28-204ENST00000468807 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.98■■□□□ 1.27
TTC28-204ENST00000468807 TIE1P35590 1138 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 GAD2Q05329 585 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 PPP1R26Q5T8A7 1209 aaPredicted RBP22.98■■□□□ 1.27
TTC28-204ENST00000468807 WBP2Q969T9 261 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 TPSD1Q9BZJ3 242 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 CISHQ9NSE2 258 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 PCDHA5Q9Y5H7 936 aa22.98■■□□□ 1.27
TTC28-204ENST00000468807 HHLA1C9JL84 531 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 ATP5C1P36542 298 aaKnown RBP22.97■■□□□ 1.27
TTC28-204ENST00000468807 EIF2DP41214 584 aaKnown RBP22.97■■□□□ 1.27
TTC28-204ENST00000468807 GOLGA8FQ08AF8 430 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 GOLGA8DPQ0D2H9 430 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 MESP2Q0VG99 397 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 ANKRD40Q6AI12 368 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 ANO7Q6IWH7 933 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 ENGASEQ8NFI3 743 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 ARID3AQ99856 593 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 OSER1Q9NX31 292 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 NUDT5Q9UKK9 219 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 MMP17Q9ULZ9 603 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 INVSQ9Y283 1065 aa22.97■■□□□ 1.27
TTC28-204ENST00000468807 A0A1W2PQH9 124 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 TRIM49BA6NDI0 452 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 DCLK1O15075 740 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 SLC16A3O15427 465 aaKnown RBP22.96■■□□□ 1.27
TTC28-204ENST00000468807 KLF8O95600 359 aaPredicted RBP22.96■■□□□ 1.27
TTC28-204ENST00000468807 RARGP13631 454 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 GBP1P32455 592 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 MRPS21P82921 87 aaKnown RBP22.96■■□□□ 1.27
TTC28-204ENST00000468807 FKBP3Q00688 224 aaKnown RBP22.96■■□□□ 1.27
TTC28-204ENST00000468807 CBWD6Q4V339 395 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 CBWD3Q5JTY5 395 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 CBWD5Q5RIA9 395 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 ISM2Q6H9L7 571 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 TMEM25Q86YD3 366 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 ALLCQ8N6M5 410 aa22.96■■□□□ 1.27
TTC28-204ENST00000468807 C12orf50Q8NA57 414 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms